RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 EFTUD2Q15029 972 aaKnown RBP eCLIP7.77□□□□□ -1.17
CCDC40-215ENST00000576033 ELOCQ15369 112 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 TERF2Q15554 542 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 ANKRD20A4Q4UJ75 823 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 ZNF658BQ4V348 819 aaPredicted RBP7.77□□□□□ -1.17
CCDC40-215ENST00000576033 CTSL3PQ5NE16 218 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 LDLRAP1Q5SW96 308 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 CEP85LQ5SZL2 805 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 NKAIN2Q5VXU1 208 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 PDPK2PQ6A1A2 396 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 ZCCHC8Q6NZY4 707 aaKnown RBP7.77□□□□□ -1.17
CCDC40-215ENST00000576033 C4orf22Q6V702 233 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 UNC5AQ6ZN44 842 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 CROCCP2Q86T23 111 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 VRK3Q8IV63 474 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 RAVER1Q8IY67 606 aaKnown RBP7.77□□□□□ -1.17
CCDC40-215ENST00000576033 FSTL5Q8N475 847 aaPredicted RBP7.77□□□□□ -1.17
CCDC40-215ENST00000576033 CHCHD4Q8N4Q1 142 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 OTUD6BQ8N6M0 293 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 ARL10Q8N8L6 244 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 Q8N9G6 341 aaPredicted RBP7.77□□□□□ -1.17
CCDC40-215ENST00000576033 LMNTD1Q8N9Z9 388 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 GPR156Q8NFN8 814 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 OR4L1Q8NH43 312 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 OR2W6PQ8NHA6 318 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 RNF31Q96EP0 1072 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 STAMBPL1Q96FJ0 436 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 PGM2Q96G03 612 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 ATP6V1G3Q96LB4 118 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 SRPK1Q96SB4 655 aaKnown RBP7.77□□□□□ -1.17
CCDC40-215ENST00000576033 LRRC4CQ9HCJ2 640 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 FBXO6Q9NRD1 293 aaPredicted RBP7.77□□□□□ -1.17
CCDC40-215ENST00000576033 RAD18Q9NS91 495 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 KCTD5Q9NXV2 234 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 ZDHHC3Q9NYG2 299 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 NINJ2Q9NZG7 142 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 BFARQ9NZS9 450 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 CIDEBQ9UHD4 219 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 APPL1Q9UKG1 709 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 ATXN7L1Q9ULK2 861 aaPredicted RBP7.77□□□□□ -1.17
CCDC40-215ENST00000576033 RUVBL2Q9Y230 463 aaKnown RBP7.77□□□□□ -1.17
CCDC40-215ENST00000576033 RPS6KL1Q9Y6S9 549 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 UBA6A0AVT1 1052 aaPredicted RBP7.76□□□□□ -1.17
CCDC40-215ENST00000576033 PDZK1P1A8MUH7 402 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 PPM1DO15297 605 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 CD3EAPO15446 510 aaKnown RBP7.76□□□□□ -1.17
CCDC40-215ENST00000576033 TNFSF14O43557 240 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 VEGFDO43915 354 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 SHOX2O60902 331 aaPredicted RBP7.76□□□□□ -1.17
CCDC40-215ENST00000576033 NIPSNAP2O75323 286 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 POP7O75817 140 aaKnown RBP7.76□□□□□ -1.17
CCDC40-215ENST00000576033 DKK1O94907 266 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 SHBGP04278 402 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 CKMT1AP12532 417 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 MLNP12872 115 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 CEACAM1P13688 526 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 ATP1B2P14415 290 aaPredicted RBP7.76□□□□□ -1.17
CCDC40-215ENST00000576033 PDHA2P29803 388 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 CSF2RBP32927 897 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 PRLHRP49683 370 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 BLKP51451 505 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 PDX1P52945 283 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 OR1D5P58170 312 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 PPP1CAP62136 330 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 PDE1BQ01064 536 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 INSM1Q01101 510 aaPredicted RBP7.76□□□□□ -1.17
CCDC40-215ENST00000576033 PDIA2Q13087 525 aaKnown RBP7.76□□□□□ -1.17
CCDC40-215ENST00000576033 GTF2H3Q13889 308 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 COL9A2Q14055 689 aaPredicted RBP7.76□□□□□ -1.17
CCDC40-215ENST00000576033 SUZ12Q15022 739 aaKnown RBP7.76□□□□□ -1.17
CCDC40-215ENST00000576033 RASA2Q15283 850 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 NR0B2Q15466 257 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 HIF1AQ16665 826 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 SKIDA1Q1XH10 827 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 C14orf28Q4W4Y0 310 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 ZNF470Q6ECI4 717 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 KIAA0930Q6ICG6 404 aaPredicted RBP7.76□□□□□ -1.17
CCDC40-215ENST00000576033 CENPUQ71F23 418 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 B3GNT8Q7Z7M8 397 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 CCDC25Q86WR0 208 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 GKN2Q86XP6 184 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 SDR16C5Q8N3Y7 309 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 FBXO36Q8NEA4 188 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 ACVR1CQ8NER5 493 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 GIMAP7Q8NHV1 300 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 UBLCP1Q8WVY7 318 aaPredicted RBP7.76□□□□□ -1.17
CCDC40-215ENST00000576033 RMDN2Q96LZ7 410 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 RUFY1Q96T51 708 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 NDNQ99608 321 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 COPS8Q99627 209 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 SLC30A3Q99726 388 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 EBNA1BP2Q99848 306 aaKnown RBP7.76□□□□□ -1.17
CCDC40-215ENST00000576033 CCDC3Q9BQI4 270 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 TBC1D10AQ9BXI6 508 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 GSDMCQ9BYG8 508 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 ROPN1BQ9BZX4 212 aaPredicted RBP7.76□□□□□ -1.17
CCDC40-215ENST00000576033 WWP1Q9H0M0 922 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 SLC32A1Q9H598 525 aa7.76□□□□□ -1.17
CCDC40-215ENST00000576033 ROPN1Q9HAT0 212 aaPredicted RBP7.76□□□□□ -1.17
CCDC40-215ENST00000576033 MRM3Q9HC36 420 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms