RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 PRSS42Q7Z5A4 293 aa17.06■□□□□ 0.32
SMG6-214ENST00000573827 TRIM48Q8IWZ4 208 aa17.06■□□□□ 0.32
SMG6-214ENST00000573827 NXPE1Q8N323 547 aa17.06■□□□□ 0.32
SMG6-214ENST00000573827 LILRA3Q8N6C8 439 aaPredicted RBP17.06■□□□□ 0.32
SMG6-214ENST00000573827 OR2L2Q8NH16 312 aa17.06■□□□□ 0.32
SMG6-214ENST00000573827 KLHL6Q8WZ60 621 aa17.06■□□□□ 0.32
SMG6-214ENST00000573827 DNAJC1Q96KC8 554 aaKnown RBP17.06■□□□□ 0.32
SMG6-214ENST00000573827 TEFMQ96QE5 360 aaKnown RBP17.06■□□□□ 0.32
SMG6-214ENST00000573827 INSM2Q96T92 566 aaPredicted RBP17.06■□□□□ 0.32
SMG6-214ENST00000573827 SLC12A9Q9BXP2 914 aa17.06■□□□□ 0.32
SMG6-214ENST00000573827 ZNF768Q9H5H4 540 aaKnown RBP17.06■□□□□ 0.32
SMG6-214ENST00000573827 TMEM184BQ9Y519 407 aaPredicted RBP17.06■□□□□ 0.32
SMG6-214ENST00000573827 NBASA2RRP1 2371 aa17.05■□□□□ 0.32
SMG6-214ENST00000573827 GOLGA6L9A6NEM1 432 aa17.05■□□□□ 0.32
SMG6-214ENST00000573827 EIF4E1BA6NMX2 242 aaKnown RBP17.05■□□□□ 0.32
SMG6-214ENST00000573827 RAD1O60671 282 aa17.05■□□□□ 0.32
SMG6-214ENST00000573827 AP2A1O95782 977 aa17.05■□□□□ 0.32
SMG6-214ENST00000573827 PRSS56P0CW18 603 aa17.05■□□□□ 0.32
SMG6-214ENST00000573827 MTHFD1P11586 935 aaKnown RBP17.05■□□□□ 0.32
SMG6-214ENST00000573827 TPH1P17752 444 aa17.05■□□□□ 0.32
SMG6-214ENST00000573827 MSH3P20585 1137 aa17.05■□□□□ 0.32
SMG6-214ENST00000573827 PDE1BQ01064 536 aa17.05■□□□□ 0.32
SMG6-214ENST00000573827 SIX1Q15475 284 aaPredicted RBP17.05■□□□□ 0.32
SMG6-214ENST00000573827 TAF1BQ53T94 588 aaPredicted RBP17.05■□□□□ 0.32
SMG6-214ENST00000573827 ARHGEF18Q6ZSZ5 1173 aa17.05■□□□□ 0.32
SMG6-214ENST00000573827 SNX20Q7Z614 316 aa17.05■□□□□ 0.32
SMG6-214ENST00000573827 TXLNBQ8N3L3 684 aa17.05■□□□□ 0.32
SMG6-214ENST00000573827 SPDYE1Q8NFV5 336 aaPredicted RBP17.05■□□□□ 0.32
SMG6-214ENST00000573827 CXorf40BQ96DE9 158 aa17.05■□□□□ 0.32
SMG6-214ENST00000573827 RMDN2Q96LZ7 410 aa17.05■□□□□ 0.32
SMG6-214ENST00000573827 TGM7Q96PF1 710 aa17.05■□□□□ 0.32
SMG6-214ENST00000573827 FAM96AQ9H5X1 160 aa17.05■□□□□ 0.32
SMG6-214ENST00000573827 LRRC40Q9H9A6 602 aa17.05■□□□□ 0.32
SMG6-214ENST00000573827 PSMD13Q9UNM6 376 aa17.05■□□□□ 0.32
SMG6-214ENST00000573827 PCDHB11Q9Y5F2 797 aa17.05■□□□□ 0.32
SMG6-214ENST00000573827 UBR5O95071 2799 aaPredicted RBP17.05■□□□□ 0.32
SMG6-214ENST00000573827 PIKFYVEQ9Y2I7 2098 aa17.05■□□□□ 0.32
SMG6-214ENST00000573827 MROH6A6NGR9 719 aa17.04■□□□□ 0.32
SMG6-214ENST00000573827 LIASO43766 372 aa17.04■□□□□ 0.32
SMG6-214ENST00000573827 ITGB2P05107 769 aa17.04■□□□□ 0.32
SMG6-214ENST00000573827 LIFP15018 202 aa17.04■□□□□ 0.32
SMG6-214ENST00000573827 AKT1P31749 480 aa17.04■□□□□ 0.32
SMG6-214ENST00000573827 PRLHRP49683 370 aa17.04■□□□□ 0.32
SMG6-214ENST00000573827 SH3BP2P78314 561 aa17.04■□□□□ 0.32
SMG6-214ENST00000573827 CYP4F2P78329 520 aa17.04■□□□□ 0.32
SMG6-214ENST00000573827 TMPRSS15P98073 1019 aa17.04■□□□□ 0.32
SMG6-214ENST00000573827 C19orf57Q0VDD7 668 aa17.04■□□□□ 0.32
SMG6-214ENST00000573827 CAPRIN2Q6IMN6 1127 aaKnown RBP17.04■□□□□ 0.32
SMG6-214ENST00000573827 DUS1LQ6P1R4 473 aaKnown RBP17.04■□□□□ 0.32
SMG6-214ENST00000573827 SLC13A5Q86YT5 568 aaPredicted RBP17.04■□□□□ 0.32
SMG6-214ENST00000573827 PIANPQ8IYJ0 282 aa17.04■□□□□ 0.32
SMG6-214ENST00000573827 ZPBPQ9BS86 351 aa17.04■□□□□ 0.32
SMG6-214ENST00000573827 ZMYND15Q9H091 742 aa17.04■□□□□ 0.32
SMG6-214ENST00000573827 WWP1Q9H0M0 922 aa17.04■□□□□ 0.32
SMG6-214ENST00000573827 NLE1Q9NVX2 485 aaPredicted RBP17.04■□□□□ 0.32
SMG6-214ENST00000573827 PIH1D1Q9NWS0 290 aaKnown RBP17.04■□□□□ 0.32
SMG6-214ENST00000573827 ZNF28P17035 718 aa17.03■□□□□ 0.32
SMG6-214ENST00000573827 AMD1P17707 334 aa17.03■□□□□ 0.32
SMG6-214ENST00000573827 PBLDP30039 288 aaPredicted RBP17.03■□□□□ 0.32
SMG6-214ENST00000573827 MC4RP32245 332 aa17.03■□□□□ 0.32
SMG6-214ENST00000573827 HADHAP40939 763 aa17.03■□□□□ 0.32
SMG6-214ENST00000573827 HALP42357 657 aa17.03■□□□□ 0.32
SMG6-214ENST00000573827 P3H1Q32P28 736 aa17.03■□□□□ 0.32
SMG6-214ENST00000573827 GPR33Q49SQ1 333 aa17.03■□□□□ 0.32
SMG6-214ENST00000573827 MEI1Q5TIA1 1274 aa17.03■□□□□ 0.32
SMG6-214ENST00000573827 CEACAM20Q6UY09 585 aa17.03■□□□□ 0.32
SMG6-214ENST00000573827 ZNF662Q6ZS27 426 aa17.03■□□□□ 0.32
SMG6-214ENST00000573827 CACNA2D3Q8IZS8 1091 aa17.03■□□□□ 0.32
SMG6-214ENST00000573827 ULK4Q96C45 1275 aa17.03■□□□□ 0.32
SMG6-214ENST00000573827 MED8Q96G25 268 aa17.03■□□□□ 0.32
SMG6-214ENST00000573827 CDKN2AIPNLQ96HQ2 116 aa17.03■□□□□ 0.32
SMG6-214ENST00000573827 SLC41A2Q96JW4 573 aa17.03■□□□□ 0.32
SMG6-214ENST00000573827 ACSL5Q9ULC5 683 aa17.03■□□□□ 0.32
SMG6-214ENST00000573827 CFAP20Q9Y6A4 193 aaKnown RBP17.03■□□□□ 0.32
SMG6-214ENST00000573827 SEC16AO15027 2179 aa17.03■□□□□ 0.32
SMG6-214ENST00000573827 SPTBP11277 2137 aa17.02■□□□□ 0.32
SMG6-214ENST00000573827 LOC101059948A0A1B0GTJ6 334 aa17.02■□□□□ 0.32
SMG6-214ENST00000573827 KLHL33A6NCF5 533 aa17.02■□□□□ 0.32
SMG6-214ENST00000573827 GOLGA6L3A6NEY3 463 aa17.02■□□□□ 0.32
SMG6-214ENST00000573827 TERTO14746 1132 aaKnown RBP17.02■□□□□ 0.32
SMG6-214ENST00000573827 STK17BO94768 372 aa17.02■□□□□ 0.32
SMG6-214ENST00000573827 SUN1O94901 812 aa17.02■□□□□ 0.32
SMG6-214ENST00000573827 ITGALP20701 1170 aa17.02■□□□□ 0.32
SMG6-214ENST00000573827 ACRV1P26436 265 aa17.02■□□□□ 0.32
SMG6-214ENST00000573827 PPM1FP49593 454 aaPredicted RBP17.02■□□□□ 0.32
SMG6-214ENST00000573827 ATP1A2P50993 1020 aa17.02■□□□□ 0.32
SMG6-214ENST00000573827 POU6F1Q14863 301 aa17.02■□□□□ 0.32
SMG6-214ENST00000573827 TBR1Q16650 682 aa17.02■□□□□ 0.32
SMG6-214ENST00000573827 PRUNE1Q86TP1 453 aa17.02■□□□□ 0.32
SMG6-214ENST00000573827 SERPINA9Q86WD7 417 aa17.02■□□□□ 0.32
SMG6-214ENST00000573827 TAB3Q8N5C8 712 aaPredicted RBP17.02■□□□□ 0.32
SMG6-214ENST00000573827 GLIS1Q8NBF1 620 aa17.02■□□□□ 0.32
SMG6-214ENST00000573827 UBE2Q2Q8WVN8 375 aa17.02■□□□□ 0.32
SMG6-214ENST00000573827 EXTL1Q92935 676 aa17.02■□□□□ 0.32
SMG6-214ENST00000573827 COPS8Q99627 209 aa17.02■□□□□ 0.32
SMG6-214ENST00000573827 TSGA10Q9BZW7 698 aa17.02■□□□□ 0.32
SMG6-214ENST00000573827 IMP3Q9NV31 184 aaKnown RBP17.02■□□□□ 0.32
SMG6-214ENST00000573827 ZDHHC3Q9NYG2 299 aa17.02■□□□□ 0.32
SMG6-214ENST00000573827 SLC24A2Q9UI40 661 aa17.02■□□□□ 0.32
SMG6-214ENST00000573827 CRLS1Q9UJA2 301 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms