RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 ACTR8Q9H981 624 aa16.61■□□□□ 0.25
LITAF-209ENST00000571688 ACOT13Q9NPJ3 140 aa16.61■□□□□ 0.25
LITAF-209ENST00000571688 SEMA4BQ9NPR2 832 aaPredicted RBP16.61■□□□□ 0.25
LITAF-209ENST00000571688 RNF19AQ9NV58 838 aa16.61■□□□□ 0.25
LITAF-209ENST00000571688 NEU3Q9UQ49 428 aa16.61■□□□□ 0.25
LITAF-209ENST00000571688 N6AMT1Q9Y5N5 214 aa16.61■□□□□ 0.25
LITAF-209ENST00000571688 EFCAB9A8MZ26 197 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 CXCR3P49682 368 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 NBPF12Q5TAG4 269 aaPredicted RBP16.6■□□□□ 0.25
LITAF-209ENST00000571688 UBE2UQ5VVX9 321 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 AGAP6Q5VW22 663 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 CES5AQ6NT32 575 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 COPS5Q92905 334 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 AGAP4Q96P64 663 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 SNX18Q96RF0 628 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 DCSTAMPQ9H295 470 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 MFSD1Q9H3U5 465 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 ARNT2Q9HBZ2 717 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 MARCH4Q9P2E8 410 aaPredicted RBP16.6■□□□□ 0.25
LITAF-209ENST00000571688 PCDHB14Q9Y5E9 798 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 H0Y626 953 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 ARNTLO00327 626 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 SOCS7O14512 581 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 PAPSS2O95340 614 aaPredicted RBP16.6■□□□□ 0.25
LITAF-209ENST00000571688 TRIM16O95361 564 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 SLC4A1P02730 911 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 COL1A2P08123 1366 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 CXCR4P61073 352 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 CHRNEQ04844 493 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 PNCKQ6P2M8 343 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 ZNF549Q6P9A3 640 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 CCBE1Q6UXH8 406 aaPredicted RBP16.6■□□□□ 0.25
LITAF-209ENST00000571688 METTL4Q8N3J2 472 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 SETD9Q8NE22 299 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 IL17RDQ8NFM7 739 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 RHBDF1Q96CC6 855 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 NPAP1Q9NZP6 1156 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 INVSQ9Y283 1065 aa16.6■□□□□ 0.25
LITAF-209ENST00000571688 NYNRINQ9P2P1 1898 aaKnown RBP16.59■□□□□ 0.25
LITAF-209ENST00000571688 FADS2O95864 444 aaKnown RBP16.59■□□□□ 0.25
LITAF-209ENST00000571688 FTH1P02794 183 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 ZNF37AP17032 561 aaPredicted RBP16.59■□□□□ 0.25
LITAF-209ENST00000571688 UGT2B10P36537 528 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 WNT3AP56704 352 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 MAP3K7CLP57077 242 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 TUBA1BP68363 451 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 PLEKHG6Q3KR16 790 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 KDELC1Q6UW63 502 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 TUBA1AQ71U36 451 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 CCDC103Q8IW40 242 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 ADHFE1Q8IWW8 467 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 ASCC1Q8N9N2 400 aaKnown RBP16.59■□□□□ 0.25
LITAF-209ENST00000571688 OR6F1Q8NGZ6 308 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 GAD1Q99259 594 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 TFB2MQ9H5Q4 396 aaKnown RBP16.59■□□□□ 0.25
LITAF-209ENST00000571688 EPS8L2Q9H6S3 715 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 LIMD1Q9UGP4 676 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 ADGRE2Q9UHX3 823 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 ZNF112Q9UJU3 913 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 ZNF221Q9UK13 617 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 CRYL1Q9Y2S2 319 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 TMA7Q9Y2S6 64 aaKnown RBP16.59■□□□□ 0.25
LITAF-209ENST00000571688 TBKBP1A7MCY6 615 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 EGFRP00533 1210 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 F9P00740 461 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 CD36P16671 472 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 GTF2E2P29084 291 aaKnown RBP16.59■□□□□ 0.25
LITAF-209ENST00000571688 PRDX3P30048 256 aaKnown RBP16.59■□□□□ 0.25
LITAF-209ENST00000571688 SUOXP51687 545 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 ARSDP51689 593 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 RABGGTBP53611 331 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 PCSK7Q16549 785 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 TMC5Q6UXY8 1006 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 ARMCX2Q7L311 632 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 GDPD3Q7L5L3 318 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 EFL1Q7Z2Z2 1120 aaKnown RBP16.59■□□□□ 0.25
LITAF-209ENST00000571688 ZNF548Q8NEK5 533 aaPredicted RBP16.59■□□□□ 0.25
LITAF-209ENST00000571688 OR2T12Q8NG77 320 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 OR8J3Q8NGG0 315 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 ITCHQ96J02 903 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 CAMKK2Q96RR4 588 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 CCDC177Q9NQR7 707 aaPredicted RBP16.59■□□□□ 0.25
LITAF-209ENST00000571688 RBM22Q9NW64 420 aaKnown RBP eCLIP16.59■□□□□ 0.25
LITAF-209ENST00000571688 SCN3BQ9NY72 215 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 ERAP1Q9NZ08 941 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 ZNF225Q9UK10 706 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 ORC6Q9Y5N6 252 aa16.59■□□□□ 0.25
LITAF-209ENST00000571688 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.58■□□□□ 0.25
LITAF-209ENST00000571688 HAT1O14929 419 aa16.58■□□□□ 0.25
LITAF-209ENST00000571688 PARNO95453 639 aaKnown RBP16.58■□□□□ 0.25
LITAF-209ENST00000571688 RPS17P08708 135 aaKnown RBP16.58■□□□□ 0.25
LITAF-209ENST00000571688 UROSP10746 265 aa16.58■□□□□ 0.25
LITAF-209ENST00000571688 HOXD8P13378 290 aaPredicted RBP16.58■□□□□ 0.25
LITAF-209ENST00000571688 PRKCAP17252 672 aa16.58■□□□□ 0.25
LITAF-209ENST00000571688 SERPINH1P50454 418 aaKnown RBP16.58■□□□□ 0.25
LITAF-209ENST00000571688 CLCNKBP51801 687 aa16.58■□□□□ 0.25
LITAF-209ENST00000571688 TRAF3Q13114 568 aa16.58■□□□□ 0.25
LITAF-209ENST00000571688 PWP1Q13610 501 aa16.58■□□□□ 0.25
LITAF-209ENST00000571688 ATP6AP1LQ52LC2 224 aa16.58■□□□□ 0.25
LITAF-209ENST00000571688 C6orf136Q5SQH8 315 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms