RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 ZNF75DP51815 510 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 MFAP3P55082 362 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 EEFSECP57772 596 aaKnown RBP4.92□□□□□ -1.62
KARSP3-201ENST00000571212 TNNC1P63316 161 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 CYP4F2P78329 520 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 SEMA3BQ13214 749 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 HNRNPDQ14103 355 aaKnown RBP4.92□□□□□ -1.62
KARSP3-201ENST00000571212 ETFDHQ16134 617 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 CNGA2Q16280 664 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 ASTE1Q2TB18 679 aaPredicted RBP4.92□□□□□ -1.62
KARSP3-201ENST00000571212 FILIP1LQ4L180 1135 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 KHDC1LQ5JSQ8 128 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 EOGTQ5NDL2 527 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 SPECC1LQ69YQ0 1117 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 GJB7Q6PEY0 223 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 LAYNQ6UX15 382 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 VSTM1Q6UX27 236 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 SYT10Q6XYQ8 523 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 C4orf50Q6ZRC1 276 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 MMS22LQ6ZRQ5 1243 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 YTHDF3Q7Z739 585 aaKnown RBP4.92□□□□□ -1.62
KARSP3-201ENST00000571212 SPATA2LQ8IUW3 424 aaPredicted RBP4.92□□□□□ -1.62
KARSP3-201ENST00000571212 SCN4BQ8IWT1 228 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 C10orf67Q8IYJ2 551 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 CCDC33Q8N5R6 958 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 IL17RCQ8NAC3 791 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 ZBTB34Q8NCN2 500 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 LSM14AQ8ND56 463 aaKnown RBP4.92□□□□□ -1.62
KARSP3-201ENST00000571212 CCDC112Q8NEF3 446 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 CEP76Q8TAP6 659 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 PPP1R35Q8TAP8 253 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 SPATA17Q96L03 361 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 SH3GL3Q99963 347 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 SLX1AQ9BQ83 275 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 CRACR2AQ9BSW2 395 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 ELOVL4Q9GZR5 314 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 LHX5Q9H2C1 402 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 PNPLA8Q9NP80 782 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 UBE2TQ9NPD8 197 aaPredicted RBP4.92□□□□□ -1.62
KARSP3-201ENST00000571212 DUSP22Q9NRW4 184 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 TMEM30AQ9NV96 361 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 CHCHD3Q9NX63 227 aaKnown RBP4.92□□□□□ -1.62
KARSP3-201ENST00000571212 PSD3Q9NYI0 1048 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 EHD2Q9NZN4 543 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 SUN2Q9UH99 717 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 DNAJC12Q9UKB3 198 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 GTF3C4Q9UKN8 822 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 NENFQ9UMX5 172 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 DSPP15924 2871 aaKnown RBP4.92□□□□□ -1.62
KARSP3-201ENST00000571212 PLXNB3Q9ULL4 1909 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 GOLGA4Q13439 2230 aaKnown RBP4.92□□□□□ -1.62
KARSP3-201ENST00000571212 PTPRBP23467 1997 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 SPAARA0A1B0GVQ0 90 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 ANTXRLA6NF34 631 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 VSTM5A8MXK1 200 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.92□□□□□ -1.62
KARSP3-201ENST00000571212 HHLA1C9JL84 531 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 SGK1O00141 431 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 TAF4O00268 1085 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 O00370 1275 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 HCRTO43612 131 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 KAT7O95251 611 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 KLF8O95600 359 aaPredicted RBP4.92□□□□□ -1.62
KARSP3-201ENST00000571212 ADCY5O95622 1261 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 OLFM2O95897 454 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 TUBB4AP04350 444 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 APODP05090 189 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 VDRP11473 427 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 PTGER3P43115 390 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 TNFRSF4P43489 277 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 KCNJ5P48544 419 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 NDST1P52848 882 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 ATXN3P54252 364 aaPredicted RBP4.92□□□□□ -1.62
KARSP3-201ENST00000571212 LOXL3P58215 753 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 YWHAEP62258 255 aaKnown RBP4.92□□□□□ -1.62
KARSP3-201ENST00000571212 SLC7A9P82251 487 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 ZBED6P86452 979 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 ZXDBP98169 803 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 DRAP1Q14919 205 aaPredicted RBP4.92□□□□□ -1.62
KARSP3-201ENST00000571212 MAPRE1Q15691 268 aaKnown RBP4.92□□□□□ -1.62
KARSP3-201ENST00000571212 DUOXA1Q1HG43 343 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 RAB41Q5JT25 222 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 AARS2Q5JTZ9 985 aaKnown RBP4.92□□□□□ -1.62
KARSP3-201ENST00000571212 LYSMD4Q5XG99 296 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 SFRP4Q6FHJ7 346 aaPredicted RBP4.92□□□□□ -1.62
KARSP3-201ENST00000571212 RGS7BPQ6MZT1 257 aaPredicted RBP4.92□□□□□ -1.62
KARSP3-201ENST00000571212 ANKRD16Q6P6B7 361 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 WDR59Q6PJI9 974 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 LCLAT1Q6UWP7 414 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 SLC36A4Q6YBV0 504 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 DENND5BQ6ZUT9 1274 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 RRAGAQ7L523 313 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 RABEPKQ7Z6M1 372 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 TTC30AQ86WT1 665 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 ZNF677Q86XU0 584 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 DENND1CQ8IV53 801 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 SCML4Q8N228 414 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 HDDC3Q8N4P3 179 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 WDTC1Q8N5D0 677 aa4.92□□□□□ -1.62
KARSP3-201ENST00000571212 ALLCQ8N6M5 410 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms