RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 PDE4DIPQ5VU43 2346 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 IGKV6D-21A0A0A0MT36 114 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 A0A0U1RQJ8 604 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 MBLAC1A4D2B0 266 aaPredicted RBP4.09□□□□□ -1.75
NUP88-202ENST00000570937 PABPN1LA6NDY0 278 aaKnown RBP4.09□□□□□ -1.75
NUP88-202ENST00000570937 BTBD18B2RXH4 712 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 LAD1O00515 517 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 MSH4O15457 936 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 MAGEB2O15479 319 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 CHMP2AO43633 222 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 SLC25A17O43808 307 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 JAK2O60674 1132 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 SERPINI2O75830 405 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 PSMD10O75832 226 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 CCNE2O96020 404 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 HSP90AA1P07900 732 aaKnown RBP4.09□□□□□ -1.75
NUP88-202ENST00000570937 ZNF8P17098 575 aaPredicted RBP4.09□□□□□ -1.75
NUP88-202ENST00000570937 SRD5A1P18405 259 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 ITGB8P26012 769 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 MARK3P27448 753 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 C21orf33P30042 268 aaPredicted RBP4.09□□□□□ -1.75
NUP88-202ENST00000570937 HOXC8P31273 242 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 CCT5P48643 541 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 CXCR3P49682 368 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 PDLIM4P50479 330 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 PSMC5P62195 406 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 PPP2R5CQ13362 524 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 NAA25Q14CX7 972 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 CALCRLQ16602 461 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 TMEM266Q2M3C6 531 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 FAM109BQ6ICB4 259 aaPredicted RBP4.09□□□□□ -1.75
NUP88-202ENST00000570937 RETSATQ6NUM9 610 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 CYP26C1Q6V0L0 522 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 NEK10Q6ZWH5 1172 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 CREB3L2Q70SY1 520 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 C16orf82Q7Z2V1 217 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 MIER3Q7Z3K6 550 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 DEFB128Q7Z7B8 93 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 LRRTM4Q86VH4 590 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 AADATQ8N5Z0 425 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 METTL13Q8N6R0 699 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 ERMNQ8TAM6 284 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 LMO3Q8TAP4 145 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 PHOSPHO2Q8TCD6 241 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 NEK9Q8TD19 979 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 SEPT8Q92599 483 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 SNAPC3Q92966 411 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 RTP4Q96DX8 246 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 CCDC43Q96MW1 224 aaKnown RBP4.09□□□□□ -1.75
NUP88-202ENST00000570937 MBOAT7Q96N66 472 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 FIZ1Q96SL8 496 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 MAP7D2Q96T17 732 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 RAB34Q9BZG1 259 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 TMEM160Q9NX00 188 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 PCDHGB5Q9Y5G0 923 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 DGKBQ9Y6T7 804 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 CNTNAP2Q9UHC6 1331 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 COL1A2P08123 1366 aa4.09□□□□□ -1.75
NUP88-202ENST00000570937 LRRC37A2A6NM11 1700 aa4.09□□□□□ -1.76
NUP88-202ENST00000570937 KIAA1217Q5T5P2 1943 aa4.09□□□□□ -1.76
NUP88-202ENST00000570937 DYTNA2CJ06 578 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 EIF3FO00303 357 aaPredicted RBP4.08□□□□□ -1.76
NUP88-202ENST00000570937 WNT9BO14905 357 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 VNN2O95498 520 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 TDP2O95551 362 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 CXCL10P02778 98 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 LCTP09848 1927 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 LAMA2P24043 3122 aaKnown RBP4.08□□□□□ -1.76
NUP88-202ENST00000570937 U2AF2P26368 475 aaKnown RBP eCLIP4.08□□□□□ -1.766e-6■□□□□ 8.6
NUP88-202ENST00000570937 GJB2P29033 226 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 FMO4P31512 558 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 PSMC2P35998 433 aaKnown RBP4.08□□□□□ -1.76
NUP88-202ENST00000570937 QARSP47897 775 aaKnown RBP4.08□□□□□ -1.76
NUP88-202ENST00000570937 YWHAZP63104 245 aaKnown RBP4.08□□□□□ -1.76
NUP88-202ENST00000570937 TUBA1BP68363 451 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 MRPS6P82932 125 aaKnown RBP4.08□□□□□ -1.76
NUP88-202ENST00000570937 NCBP1Q09161 790 aaKnown RBP4.08□□□□□ -1.76
NUP88-202ENST00000570937 PDIA5Q14554 519 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 UMODL1Q5DID0 1318 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 RILPL1Q5EBL4 403 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 XKR3Q5GH77 459 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 C9orf50Q5SZB4 431 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 C9orf57Q5W0N0 161 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 KLHL24Q6TFL4 600 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 PRSS57Q6UWY2 283 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 TRMT1LQ7Z2T5 733 aaKnown RBP4.08□□□□□ -1.76
NUP88-202ENST00000570937 ADGRG6Q86SQ4 1221 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 TNIP2Q8NFZ5 429 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 ETNPPLQ8TBG4 499 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 DNAJB3Q8WWF6 145 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 TXNDC15Q96J42 360 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 SCLT1Q96NL6 688 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 FTHL17Q9BXU8 183 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 UNC45AQ9H3U1 944 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 SLC32A1Q9H598 525 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 SLC28A3Q9HAS3 691 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 KCNMB3Q9NPA1 279 aa4.08□□□□□ -1.76
NUP88-202ENST00000570937 RANBP2P49792 3224 aaKnown RBP4.07□□□□□ -1.76
NUP88-202ENST00000570937 A0A0U1RQF3 1178 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 A0A1B0GUV1 79 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms