RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 DHRS4Q9BTZ2 278 aa10.82□□□□□ -0.68
VPS53-207ENST00000570510 TLR10Q9BXR5 811 aa10.82□□□□□ -0.68
VPS53-207ENST00000570510 CBX8Q9HC52 389 aa10.82□□□□□ -0.68
VPS53-207ENST00000570510 NT5MQ9NPB1 228 aa10.82□□□□□ -0.68
VPS53-207ENST00000570510 OLAHQ9NV23 265 aa10.82□□□□□ -0.68
VPS53-207ENST00000570510 HRASLS2Q9NWW9 162 aa10.82□□□□□ -0.68
VPS53-207ENST00000570510 SEMA5BQ9P283 1151 aa10.82□□□□□ -0.68
VPS53-207ENST00000570510 SLC23A2Q9UGH3 650 aa10.82□□□□□ -0.68
VPS53-207ENST00000570510 SERTAD3Q9UJW9 196 aa10.82□□□□□ -0.68
VPS53-207ENST00000570510 NOVA2Q9UNW9 492 aaKnown RBP10.82□□□□□ -0.68
VPS53-207ENST00000570510 NAV3Q8IVL0 2385 aa10.81□□□□□ -0.68
VPS53-207ENST00000570510 TMEM150CB9EJG8 249 aa10.81□□□□□ -0.68
VPS53-207ENST00000570510 CBFA2T2O43439 604 aa10.81□□□□□ -0.68
VPS53-207ENST00000570510 PRPSAP2O60256 369 aa10.81□□□□□ -0.68
VPS53-207ENST00000570510 CDK14O94921 469 aa10.81□□□□□ -0.68
VPS53-207ENST00000570510 CD63P08962 238 aa10.81□□□□□ -0.68
VPS53-207ENST00000570510 UNGP13051 313 aaPredicted RBP10.81□□□□□ -0.68
VPS53-207ENST00000570510 FOLR3P41439 243 aa10.81□□□□□ -0.68
VPS53-207ENST00000570510 TSFMP43897 325 aaKnown RBP10.81□□□□□ -0.68
VPS53-207ENST00000570510 SPINT3P49223 89 aa10.81□□□□□ -0.68
VPS53-207ENST00000570510 CDH6P55285 790 aa10.81□□□□□ -0.68
VPS53-207ENST00000570510 RPL7AP62424 266 aaKnown RBP10.81□□□□□ -0.68
VPS53-207ENST00000570510 FMO1Q01740 532 aa10.81□□□□□ -0.68
VPS53-207ENST00000570510 GTF2H3Q13889 308 aa10.81□□□□□ -0.68
VPS53-207ENST00000570510 ZNF169Q14929 603 aaPredicted RBP10.81□□□□□ -0.68
VPS53-207ENST00000570510 ASIC2Q16515 512 aa10.81□□□□□ -0.68
VPS53-207ENST00000570510 PTCHD3Q3KNS1 767 aa10.81□□□□□ -0.68
VPS53-207ENST00000570510 HENMT1Q5T8I9 393 aaKnown RBP10.81□□□□□ -0.68
VPS53-207ENST00000570510 TMCO3Q6UWJ1 677 aa10.81□□□□□ -0.68
VPS53-207ENST00000570510 OOSP2Q86WS3 158 aa10.81□□□□□ -0.68
VPS53-207ENST00000570510 ZNF808Q8N4W9 903 aaPredicted RBP10.81□□□□□ -0.68
VPS53-207ENST00000570510 BCORP1Q8N888 145 aa10.81□□□□□ -0.68
VPS53-207ENST00000570510 LPCAT1Q8NF37 534 aa10.81□□□□□ -0.68
VPS53-207ENST00000570510 PPP4R1Q8TF05 950 aa10.81□□□□□ -0.68
VPS53-207ENST00000570510 ITLN2Q8WWU7 325 aaPredicted RBP10.81□□□□□ -0.68
VPS53-207ENST00000570510 N4BP2L2Q92802 583 aaPredicted RBP10.81□□□□□ -0.68
VPS53-207ENST00000570510 RELTQ969Z4 430 aa10.81□□□□□ -0.68
VPS53-207ENST00000570510 TTC25Q96NG3 672 aa10.81□□□□□ -0.68
VPS53-207ENST00000570510 AGAP3Q96P47 875 aa10.81□□□□□ -0.68
VPS53-207ENST00000570510 TIMM29Q9BSF4 260 aa10.81□□□□□ -0.68
VPS53-207ENST00000570510 POLR1EQ9GZS1 481 aaKnown RBP10.81□□□□□ -0.68
VPS53-207ENST00000570510 EPS8L2Q9H6S3 715 aa10.81□□□□□ -0.68
VPS53-207ENST00000570510 ZBTB20Q9HC78 741 aaPredicted RBP10.81□□□□□ -0.68
VPS53-207ENST00000570510 CHKBQ9Y259 395 aa10.81□□□□□ -0.68
VPS53-207ENST00000570510 PTRH2Q9Y3E5 179 aaKnown RBP10.81□□□□□ -0.68
VPS53-207ENST00000570510 AKAP9Q99996 3911 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 RGSL1A5PLK6 1076 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 OR5K3A6NET4 321 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 CCL21O00585 134 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 E2F3O00716 465 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 DDX3YO15523 660 aaKnown RBP10.8□□□□□ -0.68
VPS53-207ENST00000570510 PRICKLE3O43900 615 aaPredicted RBP10.8□□□□□ -0.68
VPS53-207ENST00000570510 RNF8O76064 485 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 HBQ1P09105 142 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 BRAFP15056 766 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 CES1P23141 567 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 IL4RP24394 825 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 PSMA2P25787 234 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 PBX1P40424 430 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 ARL4AP40617 200 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 PREPP48147 710 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 ZNF135P52742 658 aaPredicted RBP10.8□□□□□ -0.68
VPS53-207ENST00000570510 CASP6P55212 293 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 UBASH3AP57075 661 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 FANCCQ00597 558 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 PRKAA1Q13131 559 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 TRIM14Q14142 442 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 TLR1Q15399 786 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 TESK1Q15569 626 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 CA9Q16790 459 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 AGAP9Q5VTM2 703 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 AGAP7PQ5VUJ5 663 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 ALS2CLQ60I27 953 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 B3GNTL1Q67FW5 361 aaPredicted RBP10.8□□□□□ -0.68
VPS53-207ENST00000570510 FAM198BQ6UWH4 519 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 TMEM207Q6UWW9 146 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 WASH2PQ6VEQ5 465 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 RPTNQ6XPR3 784 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 TRAPPC5Q8IUR0 188 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 MMP21Q8N119 569 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 GDAP1Q8TB36 358 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 TRIM11Q96F44 468 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 AGAP4Q96P64 663 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 KCTD15Q96SI1 283 aaPredicted RBP10.8□□□□□ -0.68
VPS53-207ENST00000570510 ANP32EQ9BTT0 268 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 ZSCAN5AQ9BUG6 496 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 SNRNP25Q9BV90 132 aaKnown RBP10.8□□□□□ -0.68
VPS53-207ENST00000570510 TRIM8Q9BZR9 551 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 NLRC4Q9NPP4 1024 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 PCMTD2Q9NV79 361 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 P4HTMQ9NXG6 502 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 NDOR1Q9UHB4 597 aa10.8□□□□□ -0.68
VPS53-207ENST00000570510 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.8□□□□□ -0.68
VPS53-207ENST00000570510 E7EQ34 232 aa10.79□□□□□ -0.68
VPS53-207ENST00000570510 H3BRJ5 948 aa10.79□□□□□ -0.68
VPS53-207ENST00000570510 CHUKO15111 745 aa10.79□□□□□ -0.68
VPS53-207ENST00000570510 EPHB6O15197 1021 aa10.79□□□□□ -0.68
VPS53-207ENST00000570510 KCNN4O15554 427 aa10.79□□□□□ -0.68
VPS53-207ENST00000570510 VEGFDO43915 354 aa10.79□□□□□ -0.68
VPS53-207ENST00000570510 MAFKO60675 156 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms