RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 EPHB4P54760 987 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 TAS2R50P59544 299 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 IFI35P80217 286 aaPredicted RBP7.16□□□□□ -1.26
CNOT1-222ENST00000570139 MESDQ14696 234 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 TBCCQ15814 346 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 PTPN20Q4JDL3 420 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 TEDDM1Q5T9Z0 273 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 SEL1L2Q5TEA6 688 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 LRRC38Q5VT99 294 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 WSCD1Q658N2 575 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 WDR93Q6P2C0 686 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 PSRC1Q6PGN9 363 aaPredicted RBP7.16□□□□□ -1.26
CNOT1-222ENST00000570139 RRM2BQ7LG56 351 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 POLNQ7Z5Q5 900 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 DEFB128Q7Z7B8 93 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 UBE2Q1Q7Z7E8 422 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 TMEM110Q86TL2 294 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 CAND1Q86VP6 1230 aaKnown RBP7.16□□□□□ -1.26
CNOT1-222ENST00000570139 SCML4Q8N228 414 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 WDTC1Q8N5D0 677 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 ACTRT1Q8TDG2 376 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 C2orf15Q8WU43 125 aaKnown RBP7.16□□□□□ -1.26
CNOT1-222ENST00000570139 SLC35F5Q8WV83 523 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 MAIP1Q8WWC4 291 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 TOP1MTQ969P6 601 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 ATP6V1E2Q96A05 226 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 SMARCD1Q96GM5 515 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 HTATIP2Q9BUP3 242 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 DUSP16Q9BY84 665 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 ACTRT3Q9BYD9 372 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 KRTAP4-9Q9BYQ8 210 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 MTIF3Q9H2K0 278 aaKnown RBP7.16□□□□□ -1.26
CNOT1-222ENST00000570139 ASNSD1Q9NWL6 643 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 EIF2B4Q9UI10 523 aaKnown RBP7.16□□□□□ -1.26
CNOT1-222ENST00000570139 COG5Q9UP83 839 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 ZNF711Q9Y462 761 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 ALG6Q9Y672 507 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 SLC30A1Q9Y6M5 507 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 TTC3P53804 2025 aa7.16□□□□□ -1.26
CNOT1-222ENST00000570139 CCDC187A0A096LP49 1063 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 TCRBV5S1A1TA0A578 114 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 C16orf96A6NNT2 1141 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 TEX22C9J3V5 150 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 CCDC188H7C350 402 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 DYNC1I1O14576 645 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 HSF2BPO75031 334 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 RNF8O76064 485 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 BEST1O76090 585 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 DDHD2O94830 711 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 FTCDO95954 541 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 KRT7P08729 469 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 ZNF37AP17032 561 aaPredicted RBP7.15□□□□□ -1.26
CNOT1-222ENST00000570139 LAG3P18627 525 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 CDH2P19022 906 aaPredicted RBP7.15□□□□□ -1.26
CNOT1-222ENST00000570139 COMTP21964 271 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 ACSL1P33121 698 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 PPARGP37231 505 aaPredicted RBP7.15□□□□□ -1.26
CNOT1-222ENST00000570139 ALDH7A1P49419 539 aaKnown RBP7.15□□□□□ -1.26
CNOT1-222ENST00000570139 RWDD2BP57060 319 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 CXADRP78310 365 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 HADHQ16836 314 aaKnown RBP7.15□□□□□ -1.26
CNOT1-222ENST00000570139 SPDYE7PQ495Y7 208 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 EFHC1Q5JVL4 640 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 SP5Q6BEB4 398 aaPredicted RBP7.15□□□□□ -1.26
CNOT1-222ENST00000570139 ACSM6Q6P461 480 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 FAM171BQ6P995 826 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 TMEM154Q6P9G4 183 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 HTR3DQ70Z44 454 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 SLC26A9Q7LBE3 791 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 DTX2Q86UW9 622 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 TMEM151BQ8IW70 566 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 GPR65Q8IYL9 337 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 SIX6OS1Q8N1H7 587 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 RASGEF1CQ8N431 466 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 TTC30BQ8N4P2 665 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 C12orf29Q8N999 325 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 OR52L2PQ8NGH6 319 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 SLC2A14Q8TDB8 520 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 GLMPQ8WWB7 406 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 RNFT2Q96EX2 444 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 RBM41Q96IZ5 413 aaKnown RBP7.15□□□□□ -1.26
CNOT1-222ENST00000570139 SPATA17Q96L03 361 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 RUNDC3BQ96NL0 473 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 CPXM1Q96SM3 734 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 MNTQ99583 582 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 MED10Q9BTT4 135 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 AMBRA1Q9C0C7 1298 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 DPEP3Q9H4B8 488 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 CSNK1G1Q9HCP0 422 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 DMAP1Q9NPF5 467 aaPredicted RBP7.15□□□□□ -1.26
CNOT1-222ENST00000570139 CNGB3Q9NQW8 809 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 FAM49BQ9NUQ9 324 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 THAP1Q9NVV9 213 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 EHD2Q9NZN4 543 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 KCNE2Q9Y6J6 123 aa7.15□□□□□ -1.26
CNOT1-222ENST00000570139 PTPRDP23468 1912 aa7.15□□□□□ -1.27
CNOT1-222ENST00000570139 UQCRHLA0A096LP55 91 aa7.14□□□□□ -1.27
CNOT1-222ENST00000570139 A1L4Q6 167 aa7.14□□□□□ -1.27
CNOT1-222ENST00000570139 E5RJQ4 531 aa7.14□□□□□ -1.27
CNOT1-222ENST00000570139 ZNF185O15231 689 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms