RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 ZNF423Q2M1K9 1284 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 KBTBD12Q3ZCT8 623 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 PYCR3Q53H96 274 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 TPRG1LQ5T0D9 272 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 GRTP1Q5TC63 336 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 UGT3A1Q6NUS8 523 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 TAF8Q7Z7C8 310 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 GALNT7Q86SF2 657 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 CLDN19Q8N6F1 224 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 MDM1Q8TC05 714 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 LMX1AQ8TE12 382 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 CAVIN3Q969G5 261 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 SCARF2Q96GP6 870 aaPredicted RBP15.78■□□□□ 0.12
USB1-215ENST00000569252 IL21RQ9HBE5 538 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 RABGEF1Q9UJ41 708 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 CORO1CQ9ULV4 474 aaPredicted RBP15.78■□□□□ 0.12
USB1-215ENST00000569252 PRKAB1Q9Y478 270 aa15.78■□□□□ 0.12
USB1-215ENST00000569252 ACACAQ13085 2346 aa15.77■□□□□ 0.12
USB1-215ENST00000569252 MYLKQ15746 1914 aa15.77■□□□□ 0.12
USB1-215ENST00000569252 A0A1B0GTQ1 180 aa15.77■□□□□ 0.12
USB1-215ENST00000569252 FAM159BA6NKW6 160 aa15.77■□□□□ 0.12
USB1-215ENST00000569252 TRIM16O95361 564 aa15.77■□□□□ 0.12
USB1-215ENST00000569252 AHSGP02765 367 aa15.77■□□□□ 0.12
USB1-215ENST00000569252 ABHD2P08910 425 aa15.77■□□□□ 0.12
USB1-215ENST00000569252 ALPPL2P10696 532 aa15.77■□□□□ 0.12
USB1-215ENST00000569252 PKMP14618 531 aaKnown RBP15.77■□□□□ 0.12
USB1-215ENST00000569252 PBLDP30039 288 aaPredicted RBP15.77■□□□□ 0.12
USB1-215ENST00000569252 SPRP35270 261 aaPredicted RBP15.77■□□□□ 0.12
USB1-215ENST00000569252 MSH2P43246 934 aa15.77■□□□□ 0.12
USB1-215ENST00000569252 SLC12A2P55011 1212 aa15.77■□□□□ 0.12
USB1-215ENST00000569252 MPP1Q00013 466 aa15.77■□□□□ 0.12
USB1-215ENST00000569252 SLC29A2Q14542 456 aa15.77■□□□□ 0.12
USB1-215ENST00000569252 COL28A1Q2UY09 1125 aa15.77■□□□□ 0.12
USB1-215ENST00000569252 INAVAQ3KP66 663 aa15.77■□□□□ 0.12
USB1-215ENST00000569252 BCL7AQ4VC05 210 aa15.77■□□□□ 0.12
USB1-215ENST00000569252 KHDC1Q4VXA5 237 aaKnown RBP15.77■□□□□ 0.12
USB1-215ENST00000569252 LGSNQ5TDP6 509 aa15.77■□□□□ 0.12
USB1-215ENST00000569252 TAOK1Q7L7X3 1001 aa15.77■□□□□ 0.12
USB1-215ENST00000569252 CFAP206Q8IYR0 622 aa15.77■□□□□ 0.12
USB1-215ENST00000569252 CNPY4Q8N129 248 aa15.77■□□□□ 0.12
USB1-215ENST00000569252 BEND7Q8N7W2 519 aaPredicted RBP15.77■□□□□ 0.12
USB1-215ENST00000569252 UHMK1Q8TAS1 419 aaKnown RBP15.77■□□□□ 0.12
USB1-215ENST00000569252 LPGAT1Q92604 370 aa15.77■□□□□ 0.12
USB1-215ENST00000569252 MRRFQ96E11 262 aaKnown RBP15.77■□□□□ 0.12
USB1-215ENST00000569252 PDXPQ96GD0 296 aa15.77■□□□□ 0.12
USB1-215ENST00000569252 TMEM168Q9H0V1 697 aa15.77■□□□□ 0.12
USB1-215ENST00000569252 PLAC1Q9HBJ0 212 aa15.77■□□□□ 0.12
USB1-215ENST00000569252 KLC4Q9NSK0 619 aa15.77■□□□□ 0.12
USB1-215ENST00000569252 KNL1Q8NG31 2342 aa15.77■□□□□ 0.11
USB1-215ENST00000569252 C17orf113A0A1B0GUU1 675 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 EXOC1LA0A1B0GW35 172 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 MGAT4DA6NG13 374 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 POC1B-GALNT4F8VUJ3 575 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 SCAMP1O15126 338 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 AQP9O43315 295 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 ANXA6P08133 673 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 INHBAP08476 426 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 ACP5P13686 325 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 IDSP22304 550 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 GP5P40197 560 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 PRLHRP49683 370 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 CTSCP53634 463 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 CSE1LP55060 971 aaKnown RBP15.76■□□□□ 0.11
USB1-215ENST00000569252 B4GALNT1Q00973 533 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 BNC1Q01954 994 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 PLOD1Q02809 727 aaPredicted RBP15.76■□□□□ 0.11
USB1-215ENST00000569252 IFFO1Q0D2I5 559 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 C1orf61Q13536 156 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 PLA2G4EQ3MJ16 856 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 SYTL3Q4VX76 610 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 OTOAQ7RTW8 1153 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 RAB44Q7Z6P3 723 aaPredicted RBP15.76■□□□□ 0.11
USB1-215ENST00000569252 PROSER1Q86XN7 944 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 GPATCH11Q8N954 259 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 AENQ8WTP8 325 aaKnown RBP15.76■□□□□ 0.11
USB1-215ENST00000569252 ELMO1Q92556 727 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 CRELD1Q96HD1 420 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 LINC00615Q96LM1 132 aaPredicted RBP15.76■□□□□ 0.11
USB1-215ENST00000569252 TIMM29Q9BSF4 260 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 TXLNGYQ9BZA5 131 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 OSGEPL1Q9H4B0 414 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 ACSS3Q9H6R3 686 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 SARS2Q9NP81 518 aaKnown RBP15.76■□□□□ 0.11
USB1-215ENST00000569252 TM7SF3Q9NS93 570 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 DNAJC16Q9Y2G8 782 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 CSNK1G3Q9Y6M4 447 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 SCN8AQ9UQD0 1980 aa15.76■□□□□ 0.11
USB1-215ENST00000569252 CCDC151A5D8V7 595 aa15.75■□□□□ 0.11
USB1-215ENST00000569252 CTIFO43310 598 aaKnown RBP15.75■□□□□ 0.11
USB1-215ENST00000569252 SDC3O75056 442 aa15.75■□□□□ 0.11
USB1-215ENST00000569252 VPS26AO75436 327 aa15.75■□□□□ 0.11
USB1-215ENST00000569252 PIAS2O75928 621 aa15.75■□□□□ 0.11
USB1-215ENST00000569252 FUCA1P04066 466 aa15.75■□□□□ 0.11
USB1-215ENST00000569252 APOA4P06727 396 aa15.75■□□□□ 0.11
USB1-215ENST00000569252 FTH1P19P0C7X4 201 aa15.75■□□□□ 0.11
USB1-215ENST00000569252 ITGB6P18564 788 aa15.75■□□□□ 0.11
USB1-215ENST00000569252 DGKAP23743 735 aa15.75■□□□□ 0.11
USB1-215ENST00000569252 ACTR1BP42025 376 aa15.75■□□□□ 0.11
USB1-215ENST00000569252 SKIV2L2P42285 1042 aaKnown RBP15.75■□□□□ 0.11
USB1-215ENST00000569252 ACTR1AP61163 376 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms