RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, human

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT1-215	ENST00000569020	PBLD	P30039	288 aa	Predicted RBP	13.36	□□□□□ -0.27
CNOT1-215	ENST00000569020	PPP1CA	P62136	330 aa		13.36	□□□□□ -0.27
CNOT1-215	ENST00000569020	ADCY2	Q08462	1091 aa		13.36	□□□□□ -0.27
CNOT1-215	ENST00000569020	UBAP2L	Q14157	1087 aa	Known RBP	13.36	□□□□□ -0.27
CNOT1-215	ENST00000569020	NFE2L1	Q14494	772 aa		13.36	□□□□□ -0.27
CNOT1-215	ENST00000569020	IGFBP7	Q16270	282 aa		13.36	□□□□□ -0.27
CNOT1-215	ENST00000569020	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.36	□□□□□ -0.27
CNOT1-215	ENST00000569020	FNBP1L	Q5T0N5	605 aa		13.36	□□□□□ -0.27
CNOT1-215	ENST00000569020	TCTN3	Q6NUS6	607 aa		13.36	□□□□□ -0.27
CNOT1-215	ENST00000569020	OOSP2	Q86WS3	158 aa		13.36	□□□□□ -0.27
CNOT1-215	ENST00000569020	RCOR2	Q8IZ40	523 aa		13.36	□□□□□ -0.27
CNOT1-215	ENST00000569020	BEND7	Q8N7W2	519 aa	Predicted RBP	13.36	□□□□□ -0.27
CNOT1-215	ENST00000569020	TEX19	Q8NA77	164 aa		13.36	□□□□□ -0.27
CNOT1-215	ENST00000569020	ZNF398	Q8TD17	642 aa		13.36	□□□□□ -0.27
CNOT1-215	ENST00000569020	CT55	Q8WUE5	264 aa		13.36	□□□□□ -0.27
CNOT1-215	ENST00000569020	HAUS1	Q96CS2	278 aa		13.36	□□□□□ -0.27
CNOT1-215	ENST00000569020	OXNAD1	Q96HP4	312 aa	Predicted RBP	13.36	□□□□□ -0.27
CNOT1-215	ENST00000569020	CD180	Q99467	661 aa		13.36	□□□□□ -0.27
CNOT1-215	ENST00000569020	MAP3K3	Q99759	626 aa		13.36	□□□□□ -0.27
CNOT1-215	ENST00000569020	SMOX	Q9NWM0	555 aa		13.36	□□□□□ -0.27
CNOT1-215	ENST00000569020	TRHDE	Q9UKU6	1024 aa		13.36	□□□□□ -0.27
CNOT1-215	ENST00000569020	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
CNOT1-215	ENST00000569020	TLN1	Q9Y490	2541 aa	Known RBP	13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	hCG_1818297	A0A087WSY0	165 aa		13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	KLHL33	A6NCF5	533 aa		13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	OR5K3	A6NET4	321 aa		13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	MGAT4D	A6NG13	374 aa		13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	TLCD2	A6NGC4	264 aa		13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	RFPL1	O75677	317 aa		13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	TIAF1	O95411	115 aa		13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	PRAMEF1	O95521	474 aa		13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	EBLN1	P0CF75	366 aa		13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	MTHFD1	P11586	935 aa	Known RBP	13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	MAGEA1	P43355	309 aa		13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	GEM	P55040	296 aa		13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	HADHB	P55084	474 aa	Known RBP	13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	KCNAB1	Q14722	419 aa		13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	METRNL	Q641Q3	311 aa		13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	PWWP2B	Q6NUJ5	590 aa		13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	ARMC6	Q6NXE6	501 aa		13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	DET1	Q7L5Y6	550 aa		13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	KATNAL2	Q8IYT4	538 aa		13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	ZFPM2	Q8WW38	1151 aa		13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	RBM41	Q96IZ5	413 aa	Known RBP	13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	C12orf66	Q96MD2	445 aa		13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	QKI	Q96PU8	341 aa	Known RBP eCLIP	13.35	□□□□□ -0.27	2e-10	■■■□□ 19.2
CNOT1-215	ENST00000569020	FERMT1	Q9BQL6	677 aa		13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	FGF21	Q9NSA1	209 aa		13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	HRASLS2	Q9NWW9	162 aa		13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	ACSL5	Q9ULC5	683 aa		13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	MAN2B2	Q9Y2E5	1009 aa		13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	CFAP20	Q9Y6A4	193 aa	Known RBP	13.35	□□□□□ -0.27
CNOT1-215	ENST00000569020	C2orf81	A6NN90	581 aa		13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	GAPDHS	O14556	408 aa	Predicted RBP	13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	ANXA9	O76027	345 aa		13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	AGT	P01019	485 aa		13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	NTRK1	P04629	796 aa		13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	PYGM	P11217	842 aa		13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	NR1D1	P20393	614 aa		13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	LPO	P22079	712 aa	Predicted RBP	13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	CA5A	P35218	305 aa		13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	PMS2	P54278	862 aa		13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	RPS15	P62841	145 aa	Known RBP	13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	HSD11B2	P80365	405 aa		13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	PDE1B	Q01064	536 aa		13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	GSE1	Q14687	1217 aa		13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	TAF1A	Q15573	450 aa	Predicted RBP	13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	TMTC4	Q5T4D3	741 aa		13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	ITPRIPL1	Q6GPH6	555 aa		13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	ASB18	Q6ZVZ8	466 aa		13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	TMEM135	Q86UB9	458 aa		13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	RNF214	Q8ND24	703 aa		13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	OR2L2	Q8NH16	312 aa		13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	INSM2	Q96T92	566 aa	Predicted RBP	13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	GPR87	Q9BY21	358 aa		13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	WWP1	Q9H0M0	922 aa		13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	GOLPH3	Q9H4A6	298 aa		13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	ACTL8	Q9H568	366 aa		13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	ASB8	Q9H765	288 aa		13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	ANKMY1	Q9P2S6	941 aa		13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	TLK1	Q9UKI8	766 aa		13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	COLEC10	Q9Y6Z7	277 aa		13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	TNRC6A	Q8NDV7	1962 aa	Known RBP	13.34	□□□□□ -0.27
CNOT1-215	ENST00000569020	C5orf60	A6NFR6	353 aa		13.33	□□□□□ -0.28
CNOT1-215	ENST00000569020		H7C0C1	242 aa		13.33	□□□□□ -0.28
CNOT1-215	ENST00000569020	APOC4-APOC2	K7ER74	178 aa		13.33	□□□□□ -0.28
CNOT1-215	ENST00000569020	CPNE3	O75131	537 aa	Known RBP	13.33	□□□□□ -0.28
CNOT1-215	ENST00000569020	SRP72	O76094	671 aa	Known RBP	13.33	□□□□□ -0.28
CNOT1-215	ENST00000569020	ZBTB11	O95625	1053 aa	Predicted RBP	13.33	□□□□□ -0.28
CNOT1-215	ENST00000569020	APOC2	P02655	101 aa		13.33	□□□□□ -0.28
CNOT1-215	ENST00000569020	SLC35G4	P0C7Q5	338 aa		13.33	□□□□□ -0.28
CNOT1-215	ENST00000569020	RALB	P11234	206 aa		13.33	□□□□□ -0.28
CNOT1-215	ENST00000569020	RBL1	P28749	1068 aa		13.33	□□□□□ -0.28
CNOT1-215	ENST00000569020	PTPN4	P29074	926 aa		13.33	□□□□□ -0.28
CNOT1-215	ENST00000569020	ATP5O	P48047	213 aa		13.33	□□□□□ -0.28
CNOT1-215	ENST00000569020	TUBB4B	P68371	445 aa		13.33	□□□□□ -0.28
CNOT1-215	ENST00000569020	SRSF1	Q07955	248 aa	Known RBP eCLIP	13.33	□□□□□ -0.28
CNOT1-215	ENST00000569020	SEMA5A	Q13591	1074 aa		13.33	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms