RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 GFM2Q969S9 779 aaKnown RBP16.9■□□□□ 0.3
VAC14-210ENST00000568548 NCLNQ969V3 563 aa16.9■□□□□ 0.3
VAC14-210ENST00000568548 KIAA1191Q96A73 305 aa16.9■□□□□ 0.3
VAC14-210ENST00000568548 ZNF599Q96NL3 588 aa16.9■□□□□ 0.3
VAC14-210ENST00000568548 RHNO1Q9BSD3 238 aa16.9■□□□□ 0.3
VAC14-210ENST00000568548 PRDM5Q9NQX1 630 aaPredicted RBP16.9■□□□□ 0.3
VAC14-210ENST00000568548 INIPQ9NRY2 104 aa16.9■□□□□ 0.3
VAC14-210ENST00000568548 TRMT13Q9NUP7 481 aaKnown RBP16.9■□□□□ 0.3
VAC14-210ENST00000568548 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.9■□□□□ 0.3
VAC14-210ENST00000568548 PCTPQ9UKL6 214 aa16.9■□□□□ 0.3
VAC14-210ENST00000568548 PAIP2BQ9ULR5 123 aaKnown RBP16.9■□□□□ 0.3
VAC14-210ENST00000568548 CFAP99D6REC4 459 aa16.9■□□□□ 0.3
VAC14-210ENST00000568548 GSTA4O15217 222 aa16.9■□□□□ 0.3
VAC14-210ENST00000568548 ZNF135P52742 658 aaPredicted RBP16.9■□□□□ 0.3
VAC14-210ENST00000568548 RELAQ04206 551 aa16.9■□□□□ 0.3
VAC14-210ENST00000568548 SERINC3Q13530 473 aa16.9■□□□□ 0.3
VAC14-210ENST00000568548 ZNF829Q3KNS6 432 aaPredicted RBP16.9■□□□□ 0.3
VAC14-210ENST00000568548 NADSYN1Q6IA69 706 aa16.9■□□□□ 0.3
VAC14-210ENST00000568548 MBOAT1Q6ZNC8 495 aa16.9■□□□□ 0.3
VAC14-210ENST00000568548 GPRIN3Q6ZVF9 776 aa16.9■□□□□ 0.3
VAC14-210ENST00000568548 BRSK1Q8TDC3 778 aa16.9■□□□□ 0.3
VAC14-210ENST00000568548 POLE4Q9NR33 117 aa16.9■□□□□ 0.3
VAC14-210ENST00000568548 RNF186Q9NXI6 227 aa16.9■□□□□ 0.3
VAC14-210ENST00000568548 TLR6Q9Y2C9 796 aa16.9■□□□□ 0.3
VAC14-210ENST00000568548 A0A1W2PQ67 120 aa16.89■□□□□ 0.29
VAC14-210ENST00000568548 CHEK2O96017 543 aa16.89■□□□□ 0.29
VAC14-210ENST00000568548 IRF1P10914 325 aa16.89■□□□□ 0.29
VAC14-210ENST00000568548 MC4RP32245 332 aa16.89■□□□□ 0.29
VAC14-210ENST00000568548 RPL9P32969 192 aaKnown RBP16.89■□□□□ 0.29
VAC14-210ENST00000568548 HSPA7P48741 367 aa16.89■□□□□ 0.29
VAC14-210ENST00000568548 RPL38P63173 70 aaKnown RBP16.89■□□□□ 0.29
VAC14-210ENST00000568548 AP5B1Q2VPB7 878 aa16.89■□□□□ 0.29
VAC14-210ENST00000568548 GCNT7Q6ZNI0 430 aa16.89■□□□□ 0.29
VAC14-210ENST00000568548 RBM23Q86U06 439 aaKnown RBP16.89■□□□□ 0.29
VAC14-210ENST00000568548 MON1AQ86VX9 555 aa16.89■□□□□ 0.29
VAC14-210ENST00000568548 C10orf111Q8N326 155 aa16.89■□□□□ 0.29
VAC14-210ENST00000568548 ZBTB8BQ8NAP8 495 aaPredicted RBP16.89■□□□□ 0.29
VAC14-210ENST00000568548 SLC6A13Q9NSD5 602 aa16.89■□□□□ 0.29
VAC14-210ENST00000568548 GIT1Q9Y2X7 761 aa16.89■□□□□ 0.29
VAC14-210ENST00000568548 TMEM247A6NEH6 219 aa16.89■□□□□ 0.29
VAC14-210ENST00000568548 TMEM88BA6NKF7 163 aa16.89■□□□□ 0.29
VAC14-210ENST00000568548 HS6ST1O60243 411 aa16.89■□□□□ 0.29
VAC14-210ENST00000568548 MITFO75030 526 aaPredicted RBP16.89■□□□□ 0.29
VAC14-210ENST00000568548 E2F6O75461 281 aa16.89■□□□□ 0.29
VAC14-210ENST00000568548 ZNF189O75820 626 aaPredicted RBP16.89■□□□□ 0.29
VAC14-210ENST00000568548 INMTO95050 263 aa16.89■□□□□ 0.29
VAC14-210ENST00000568548 SPCS2Q15005 226 aa16.89■□□□□ 0.29
VAC14-210ENST00000568548 CCNYL2Q5T2Q4 361 aa16.89■□□□□ 0.29
VAC14-210ENST00000568548 ZNF683Q8IZ20 524 aa16.89■□□□□ 0.29
VAC14-210ENST00000568548 SLC22A17Q8WUG5 538 aa16.89■□□□□ 0.29
VAC14-210ENST00000568548 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.89■□□□□ 0.298e-7■■■■□ 25.8
VAC14-210ENST00000568548 NSUN3Q9H649 340 aaKnown RBP16.89■□□□□ 0.29
VAC14-210ENST00000568548 SACM1LQ9NTJ5 587 aa16.89■□□□□ 0.29
VAC14-210ENST00000568548 DAPK2Q9UIK4 370 aa16.89■□□□□ 0.29
VAC14-210ENST00000568548 LEF1Q9UJU2 399 aaPredicted RBP16.89■□□□□ 0.29
VAC14-210ENST00000568548 PCDHB3Q9Y5E6 796 aa16.89■□□□□ 0.29
VAC14-210ENST00000568548 ESRRBO95718 433 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 GPIP06744 558 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 EFNA1P20827 205 aaPredicted RBP16.88■□□□□ 0.29
VAC14-210ENST00000568548 TGFBR1P36897 503 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 EIF2B2P49770 351 aaKnown RBP16.88■□□□□ 0.29
VAC14-210ENST00000568548 ATP4BP51164 291 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 TUSC3Q13454 348 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 PRMT9Q6P2P2 845 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 TBC1D21Q8IYX1 336 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 CNIH3Q8TBE1 160 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 SLC39A13Q96H72 371 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 BDH2Q9BUT1 245 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 NACA2Q9H009 215 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 ACTL8Q9H568 366 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 TFB2MQ9H5Q4 396 aaKnown RBP16.88■□□□□ 0.29
VAC14-210ENST00000568548 GKN1Q9NS71 199 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 TMEM248Q9NWD8 314 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 TRMT6Q9UJA5 497 aaKnown RBP16.88■□□□□ 0.29
VAC14-210ENST00000568548 TRIM43BA6NCK2 446 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 UPK1AO00322 258 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 SNAP91O60641 907 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 AOC2O75106 756 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 PAPSS2O95340 614 aaPredicted RBP16.88■□□□□ 0.29
VAC14-210ENST00000568548 ALDH1A1P00352 501 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 CST1P01037 141 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 MAGP20916 626 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 CA5AP35218 305 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 SGSHP51688 502 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 NKX3-2P78367 333 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 TWF1Q12792 350 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 PRKG2Q13237 762 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 DNASE1L3Q13609 305 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 CTU2Q2VPK5 515 aaKnown RBP16.88■□□□□ 0.29
VAC14-210ENST00000568548 TRIM16LQ309B1 348 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 FAM117BQ6P1L5 589 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 TMEM179BQ7Z7N9 219 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 TRIM54Q9BYV2 358 aa16.88■□□□□ 0.29
VAC14-210ENST00000568548 AGRPO00253 132 aa16.87■□□□□ 0.29
VAC14-210ENST00000568548 CAPN15O75808 1086 aa16.87■□□□□ 0.29
VAC14-210ENST00000568548 PRKD3O94806 890 aa16.87■□□□□ 0.29
VAC14-210ENST00000568548 MATN4O95460 622 aa16.87■□□□□ 0.29
VAC14-210ENST00000568548 DCKP27707 260 aa16.87■□□□□ 0.29
VAC14-210ENST00000568548 OPRL1P41146 370 aa16.87■□□□□ 0.29
VAC14-210ENST00000568548 PLA2G16P53816 162 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms