RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 USP51Q70EK9 711 aa16.55■□□□□ 0.24
CMTM3-213ENST00000566756 KIAA2013Q8IYS2 634 aa16.55■□□□□ 0.24
CMTM3-213ENST00000566756 AADATQ8N5Z0 425 aa16.55■□□□□ 0.24
CMTM3-213ENST00000566756 DNAJB14Q8TBM8 379 aa16.55■□□□□ 0.24
CMTM3-213ENST00000566756 GRIN3AQ8TCU5 1115 aa16.55■□□□□ 0.24
CMTM3-213ENST00000566756 RMDN1Q96DB5 314 aa16.55■□□□□ 0.24
CMTM3-213ENST00000566756 CNDP2Q96KP4 475 aaKnown RBP16.55■□□□□ 0.24
CMTM3-213ENST00000566756 BDH2Q9BUT1 245 aa16.55■□□□□ 0.24
CMTM3-213ENST00000566756 NANOGQ9H9S0 305 aa16.55■□□□□ 0.24
CMTM3-213ENST00000566756 TRPM5Q9NZQ8 1165 aa16.55■□□□□ 0.24
CMTM3-213ENST00000566756 PCDHB3Q9Y5E6 796 aa16.55■□□□□ 0.24
CMTM3-213ENST00000566756 DENND4CQ5VZ89 1909 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 OBSL1O75147 1896 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 ILVBLA1L0T0 632 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 H3BNC9 293 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 CLOCKO15516 846 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 CLDN11O75508 207 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 C1RP00736 705 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 ESR1P03372 595 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 GNAO1P09471 354 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 PRSS56P0CW18 603 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 RPS9P46781 194 aaKnown RBP16.54■□□□□ 0.24
CMTM3-213ENST00000566756 SLC11A2P49281 568 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 EMP3P54852 163 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 UFM1P61960 85 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 ECT2LQ008S8 904 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 PCBP2Q15366 365 aaKnown RBP eCLIP16.54■□□□□ 0.24
CMTM3-213ENST00000566756 CRY1Q16526 586 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 ATP6AP1LQ52LC2 224 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 RABL3Q5HYI8 236 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 PSRC1Q6PGN9 363 aaPredicted RBP16.54■□□□□ 0.24
CMTM3-213ENST00000566756 STK40Q8N2I9 435 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 CD200R1Q8TD46 325 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 BPIFB1Q8TDL5 484 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 BADQ92934 168 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 VPS33AQ96AX1 596 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 TEX37Q96LM6 180 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 DOK1Q99704 481 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 ADGRE3Q9BY15 652 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 SCUBE2Q9NQ36 999 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 TNPO3Q9Y5L0 923 aaKnown RBP16.54■□□□□ 0.24
CMTM3-213ENST00000566756 FADS3Q9Y5Q0 445 aa16.54■□□□□ 0.24
CMTM3-213ENST00000566756 FAM149AA5PLN7 773 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 GOLGA8CPA6NN73 597 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 TEX28O15482 410 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 NELFEP18615 380 aaKnown RBP16.53■□□□□ 0.24
CMTM3-213ENST00000566756 EN2P19622 333 aaPredicted RBP16.53■□□□□ 0.24
CMTM3-213ENST00000566756 PRDX3P30048 256 aaKnown RBP16.53■□□□□ 0.24
CMTM3-213ENST00000566756 PTGER3P43115 390 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 TAF12Q16514 161 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 RBBP7Q16576 425 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 CTSL3PQ5NE16 218 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 TMEM240Q5SV17 173 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 RNF165Q6ZSG1 346 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 CHST9Q7L1S5 443 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 GPR180Q86V85 440 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 OR7D4Q8NG98 312 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 OR2T11Q8NH01 316 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 PROKR1Q8TCW9 393 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 SP7Q8TDD2 431 aaPredicted RBP16.53■□□□□ 0.24
CMTM3-213ENST00000566756 ISOC1Q96CN7 298 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 TUBA1CQ9BQE3 449 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 INSL5Q9Y5Q6 135 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 C9JVG2 144 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 PRRG1O14668 218 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 EI24O14681 340 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 PRSS23O95084 383 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 F11P03951 625 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 CDH1P12830 882 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 UGT1A6P19224 532 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 SLC6A4P31645 630 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 AGTR2P50052 363 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 HK3P52790 923 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 CDH15P55291 814 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 YBX1P67809 324 aaKnown RBP16.53■□□□□ 0.24
CMTM3-213ENST00000566756 ADARB1P78563 741 aaKnown RBP16.53■□□□□ 0.24
CMTM3-213ENST00000566756 PLD1Q13393 1074 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 SMU1Q2TAY7 513 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 CYBRD1Q53TN4 286 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 DNAJB7Q7Z6W7 309 aaPredicted RBP16.53■□□□□ 0.24
CMTM3-213ENST00000566756 PHOSPHO2Q8TCD6 241 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 AUTS2Q8WXX7 1259 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 PLD4Q96BZ4 506 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 PPP1R14BQ96C90 147 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 NSMCE3Q96MG7 304 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 GALPQ9UBC7 116 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 ZNHIT2Q9UHR6 403 aa16.53■□□□□ 0.24
CMTM3-213ENST00000566756 ZFP37Q9Y6Q3 630 aaPredicted RBP16.53■□□□□ 0.24
CMTM3-213ENST00000566756 MTCL1Q9Y4B5 1905 aaKnown RBP16.52■□□□□ 0.24
CMTM3-213ENST00000566756 COCHO43405 550 aa16.52■□□□□ 0.24
CMTM3-213ENST00000566756 SYNCRIPO60506 623 aaKnown RBP16.52■□□□□ 0.24
CMTM3-213ENST00000566756 TPST1O60507 370 aa16.52■□□□□ 0.24
CMTM3-213ENST00000566756 MTHFD1P11586 935 aaKnown RBP16.52■□□□□ 0.24
CMTM3-213ENST00000566756 MC4RP32245 332 aa16.52■□□□□ 0.24
CMTM3-213ENST00000566756 RGRP47804 291 aa16.52■□□□□ 0.24
CMTM3-213ENST00000566756 SCNN1BP51168 640 aa16.52■□□□□ 0.24
CMTM3-213ENST00000566756 KCNQ1P51787 676 aa16.52■□□□□ 0.24
CMTM3-213ENST00000566756 EPHB3P54753 998 aa16.52■□□□□ 0.24
CMTM3-213ENST00000566756 TWF1Q12792 350 aa16.52■□□□□ 0.24
CMTM3-213ENST00000566756 RIMKLAQ8IXN7 391 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms