RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 RGS11O94810 467 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 TOMM70O94826 608 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 GLCEO94923 617 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 ZNF202O95125 648 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 NDUFA10O95299 355 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 PCCBP05166 539 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 CTAGE8P0CG41 777 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 AKR1A1P14550 325 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 ST6GAL1P15907 406 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 NDUFB7P17568 137 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 DDX5P17844 614 aaKnown RBP3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 SRD5A1P18405 259 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 UGT1A6P19224 532 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 PSMA5P28066 241 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 PSMB4P28070 264 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 TKTP29401 623 aaKnown RBP3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 RYKP34925 604 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 SOX6P35712 828 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 MDH1P40925 334 aaKnown RBP3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 ATP5OP48047 213 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 ARCN1P48444 511 aaKnown RBP3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 ZNF84P51523 738 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 CLCNKBP51801 687 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 NXPH1P58417 271 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 CCNA1P78396 465 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 SLC25A3Q00325 362 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 CFHR3Q02985 330 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 HHEXQ03014 270 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 KIF5AQ12840 1032 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 CHIT1Q13231 466 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 CRHR2Q13324 411 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 MTA1Q13330 715 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 SHBQ15464 509 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 TRADDQ15628 312 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 UGCGQ16739 394 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 SOWAHAQ2M3V2 549 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 KCTD21Q4G0X4 260 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 MCMDC2Q4G0Z9 681 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 RIPPLY2Q5TAB7 128 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 ALS2CLQ60I27 953 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 CENPPQ6IPU0 288 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 ENPP7Q6UWV6 458 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 NAPRTQ6XQN6 538 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 TRIM72Q6ZMU5 477 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 PQLC2Q6ZP29 291 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 ADAMTSL2Q86TH1 951 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 TSPAN33Q86UF1 283 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 CTAGE6Q86UF2 777 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 TRIM74Q86UV6 250 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 TRIM73Q86UV7 250 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 IGFN1Q86VF2 1251 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 NUDT13Q86X67 352 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 CIR1Q86X95 450 aaPredicted RBP3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 ZNF575Q86XF7 245 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 SFTPA1Q8IWL2 248 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 CTAGE4Q8IX94 777 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 CDH26Q8IXH8 852 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 C4orf19Q8IY42 314 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 RASGEF1CQ8N431 466 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 EXD3Q8N9H8 876 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 CPEB3Q8NE35 698 aaKnown RBP3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 CMASQ8NFW8 434 aaPredicted RBP3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 OR4N2Q8NGD1 307 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 C9orf43Q8TAL5 461 aaPredicted RBP3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 TRPC4APQ8TEL6 797 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 TFAP2BQ92481 460 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 SLAMF9Q96A28 289 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 RNF183Q96D59 192 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 ARSGQ96EG1 525 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 CLMNQ96JQ2 1002 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 ZNF570Q96NI8 536 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 MUS81Q96NY9 551 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 SMC6Q96SB8 1091 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 ACOX2Q99424 681 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 NAP1L3Q99457 506 aaPredicted RBP3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 SEPHS2Q99611 448 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 PRRX2Q99811 253 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 ALG8Q9BVK2 526 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 FNDC11Q9BVV2 318 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 LHPPQ9H008 270 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 RAD21L1Q9H4I0 556 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 ACTR5Q9H9F9 607 aaPredicted RBP3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 LMAN1LQ9HAT1 526 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 ZNF304Q9HCX3 659 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 PPANQ9NQ55 473 aaKnown RBP3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 DDX4Q9NQI0 724 aaKnown RBP3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 FAM212BQ9NTI7 297 aaPredicted RBP3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 NMRK1Q9NWW6 199 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 CISD1Q9NZ45 108 aaKnown RBP3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 EXTL2Q9UBQ6 330 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 OR14J1Q9UGF5 321 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 TESQ9UGI8 421 aaKnown RBP3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 DBNLQ9UJU6 430 aaKnown RBP3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 ADAMTS5Q9UNA0 930 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 SH2B3Q9UQQ2 575 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 EXOC6BQ9Y2D4 811 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 NESP48681 1621 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 MED1Q15648 1581 aaPredicted RBP3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 WDR62O43379 1518 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms