RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.47□□□□□ -0.41
RNF40-208ENST00000565995 CNTD1Q8N815 330 aa12.47□□□□□ -0.41
RNF40-208ENST00000565995 FAF2Q96CS3 445 aa12.47□□□□□ -0.41
RNF40-208ENST00000565995 SNRNP40Q96DI7 357 aaKnown RBP12.47□□□□□ -0.41
RNF40-208ENST00000565995 SRPK1Q96SB4 655 aaKnown RBP12.47□□□□□ -0.41
RNF40-208ENST00000565995 ZNF670Q9BS34 389 aa12.47□□□□□ -0.41
RNF40-208ENST00000565995 CHST8Q9H2A9 424 aa12.47□□□□□ -0.41
RNF40-208ENST00000565995 TCFL5Q9UL49 500 aa12.47□□□□□ -0.41
RNF40-208ENST00000565995 MYO7BQ6PIF6 2116 aa12.47□□□□□ -0.41
RNF40-208ENST00000565995 CSMD2Q7Z408 3487 aa12.46□□□□□ -0.41
RNF40-208ENST00000565995 C2CD3Q4AC94 2353 aa12.46□□□□□ -0.41
RNF40-208ENST00000565995 OR5K3A6NET4 321 aa12.46□□□□□ -0.41
RNF40-208ENST00000565995 MEN1O00255 615 aa12.46□□□□□ -0.41
RNF40-208ENST00000565995 ZBTB11O95625 1053 aaPredicted RBP12.46□□□□□ -0.41
RNF40-208ENST00000565995 KLK3P07288 261 aaPredicted RBP12.46□□□□□ -0.41
RNF40-208ENST00000565995 TPM1P09493 284 aa12.46□□□□□ -0.41
RNF40-208ENST00000565995 TNFRSF8P28908 595 aa12.46□□□□□ -0.41
RNF40-208ENST00000565995 RORAP35398 523 aa12.46□□□□□ -0.41
RNF40-208ENST00000565995 HALP42357 657 aa12.46□□□□□ -0.41
RNF40-208ENST00000565995 RRADP55042 308 aa12.46□□□□□ -0.41
RNF40-208ENST00000565995 ITGA1P56199 1179 aa12.46□□□□□ -0.41
RNF40-208ENST00000565995 PPIDQ08752 370 aaKnown RBP12.46□□□□□ -0.41
RNF40-208ENST00000565995 GALNT3Q14435 633 aa12.46□□□□□ -0.41
RNF40-208ENST00000565995 PDK2Q15119 407 aa12.46□□□□□ -0.41
RNF40-208ENST00000565995 PLEKHN1Q494U1 663 aaPredicted RBP12.46□□□□□ -0.41
RNF40-208ENST00000565995 ZRANB3Q5FWF4 1079 aa12.46□□□□□ -0.41
RNF40-208ENST00000565995 ALS2CLQ60I27 953 aa12.46□□□□□ -0.41
RNF40-208ENST00000565995 LCN10Q6JVE6 187 aa12.46□□□□□ -0.41
RNF40-208ENST00000565995 PQLC3Q8N755 202 aa12.46□□□□□ -0.41
RNF40-208ENST00000565995 TTC13Q8NBP0 860 aa12.46□□□□□ -0.41
RNF40-208ENST00000565995 SPC24Q8NBT2 197 aa12.46□□□□□ -0.41
RNF40-208ENST00000565995 GPR150Q8NGU9 434 aa12.46□□□□□ -0.41
RNF40-208ENST00000565995 MR1Q95460 341 aa12.46□□□□□ -0.41
RNF40-208ENST00000565995 C19orf60Q96EN9 201 aa12.46□□□□□ -0.41
RNF40-208ENST00000565995 IMP4Q96G21 291 aaKnown RBP12.46□□□□□ -0.41
RNF40-208ENST00000565995 SYTL2Q9HCH5 934 aa12.46□□□□□ -0.41
RNF40-208ENST00000565995 GPR83Q9NYM4 423 aa12.46□□□□□ -0.41
RNF40-208ENST00000565995 G3BP2Q9UN86 482 aaKnown RBP12.46□□□□□ -0.41
RNF40-208ENST00000565995 ZNF711Q9Y462 761 aa12.46□□□□□ -0.41
RNF40-208ENST00000565995 TTLL3Q9Y4R7 772 aa12.46□□□□□ -0.41
RNF40-208ENST00000565995 ADGRG4Q8IZF6 3080 aa12.46□□□□□ -0.42
RNF40-208ENST00000565995 MTX2O75431 263 aa12.45□□□□□ -0.42
RNF40-208ENST00000565995 CYP1A2P05177 515 aa12.45□□□□□ -0.42
RNF40-208ENST00000565995 POU3F2P20265 443 aaPredicted RBP12.45□□□□□ -0.42
RNF40-208ENST00000565995 ELAVL4P26378 380 aaKnown RBP12.45□□□□□ -0.42
RNF40-208ENST00000565995 CDC25BP30305 580 aa12.45□□□□□ -0.42
RNF40-208ENST00000565995 HMGCLP35914 325 aa12.45□□□□□ -0.42
RNF40-208ENST00000565995 KLHL30Q0D2K2 578 aa12.45□□□□□ -0.42
RNF40-208ENST00000565995 NR6A1Q15406 480 aa12.45□□□□□ -0.42
RNF40-208ENST00000565995 GPR19Q15760 415 aa12.45□□□□□ -0.42
RNF40-208ENST00000565995 HADHQ16836 314 aaKnown RBP12.45□□□□□ -0.42
RNF40-208ENST00000565995 ATP13A5Q4VNC0 1218 aa12.45□□□□□ -0.42
RNF40-208ENST00000565995 ATP13A4Q4VNC1 1196 aa12.45□□□□□ -0.42
RNF40-208ENST00000565995 DNTTIP2Q5QJE6 756 aaKnown RBP12.45□□□□□ -0.42
RNF40-208ENST00000565995 METRNLQ641Q3 311 aa12.45□□□□□ -0.42
RNF40-208ENST00000565995 AMZ2Q86W34 360 aa12.45□□□□□ -0.42
RNF40-208ENST00000565995 TMEM126BQ8IUX1 230 aa12.45□□□□□ -0.42
RNF40-208ENST00000565995 VSTM4Q8IW00 320 aa12.45□□□□□ -0.42
RNF40-208ENST00000565995 IQCKQ8N0W5 287 aa12.45□□□□□ -0.42
RNF40-208ENST00000565995 ZBTB2Q8N680 514 aa12.45□□□□□ -0.42
RNF40-208ENST00000565995 ENDOVQ8N8Q3 282 aaKnown RBP12.45□□□□□ -0.42
RNF40-208ENST00000565995 CPT1BQ92523 772 aa12.45□□□□□ -0.42
RNF40-208ENST00000565995 BTBD6Q96KE9 485 aa12.45□□□□□ -0.42
RNF40-208ENST00000565995 C5orf34Q96MH7 638 aa12.45□□□□□ -0.42
RNF40-208ENST00000565995 RANBP9Q96S59 729 aa12.45□□□□□ -0.42
RNF40-208ENST00000565995 MFRPQ9BY79 579 aa12.45□□□□□ -0.42
RNF40-208ENST00000565995 ASF1BQ9NVP2 202 aa12.45□□□□□ -0.42
RNF40-208ENST00000565995 HRASLS2Q9NWW9 162 aa12.45□□□□□ -0.42
RNF40-208ENST00000565995 SNX7Q9UNH6 387 aa12.45□□□□□ -0.42
RNF40-208ENST00000565995 SHOC2Q9UQ13 582 aa12.45□□□□□ -0.42
RNF40-208ENST00000565995 MED13LQ71F56 2210 aa12.44□□□□□ -0.42
RNF40-208ENST00000565995 UBA6A0AVT1 1052 aaPredicted RBP12.44□□□□□ -0.42
RNF40-208ENST00000565995 ZNF185O15231 689 aa12.44□□□□□ -0.42
RNF40-208ENST00000565995 KRT86O43790 486 aa12.44□□□□□ -0.42
RNF40-208ENST00000565995 PTMAP06454 111 aaKnown RBP12.44□□□□□ -0.42
RNF40-208ENST00000565995 ARL4DP49703 201 aa12.44□□□□□ -0.42
RNF40-208ENST00000565995 SOX8P57073 446 aa12.44□□□□□ -0.42
RNF40-208ENST00000565995 GBE1Q04446 702 aa12.44□□□□□ -0.42
RNF40-208ENST00000565995 CDK18Q07002 472 aa12.44□□□□□ -0.42
RNF40-208ENST00000565995 PLCL1Q15111 1095 aa12.44□□□□□ -0.42
RNF40-208ENST00000565995 ZNF789Q5FWF6 425 aa12.44□□□□□ -0.42
RNF40-208ENST00000565995 TMTC4Q5T4D3 741 aa12.44□□□□□ -0.42
RNF40-208ENST00000565995 NT5DC3Q86UY8 548 aa12.44□□□□□ -0.42
RNF40-208ENST00000565995 TRAPPC5Q8IUR0 188 aa12.44□□□□□ -0.42
RNF40-208ENST00000565995 MAP7D3Q8IWC1 876 aa12.44□□□□□ -0.42
RNF40-208ENST00000565995 LRRN4Q8WUT4 740 aa12.44□□□□□ -0.42
RNF40-208ENST00000565995 DPH2Q9BQC3 489 aaPredicted RBP12.44□□□□□ -0.42
RNF40-208ENST00000565995 GPR63Q9BZJ6 419 aa12.44□□□□□ -0.42
RNF40-208ENST00000565995 THAP2Q9H0W7 228 aa12.44□□□□□ -0.42
RNF40-208ENST00000565995 SLC25A51Q9H1U9 297 aa12.44□□□□□ -0.42
RNF40-208ENST00000565995 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.44□□□□□ -0.42
RNF40-208ENST00000565995 LUZP4Q9P127 313 aa12.44□□□□□ -0.42
RNF40-208ENST00000565995 TRIM10Q9UDY6 481 aa12.44□□□□□ -0.42
RNF40-208ENST00000565995 ANAPC7Q9UJX3 599 aa12.44□□□□□ -0.42
RNF40-208ENST00000565995 B3GNT3Q9Y2A9 372 aa12.44□□□□□ -0.42
RNF40-208ENST00000565995 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.44□□□□□ -0.422e-6■■■□□ 14.6
RNF40-208ENST00000565995 KLHL33A6NCF5 533 aa12.43□□□□□ -0.42
RNF40-208ENST00000565995 MYO1FO00160 1098 aa12.43□□□□□ -0.42
RNF40-208ENST00000565995 KCNK1O00180 336 aa12.43□□□□□ -0.42
RNF40-208ENST00000565995 AURKAO14965 403 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms