RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 ATP1A1P05023 1023 aaKnown RBP4.25□□□□□ -1.73
LINC00561-201ENST00000565815 CHRM5P08912 532 aaPredicted RBP4.25□□□□□ -1.73
LINC00561-201ENST00000565815 MAN1A1P33908 653 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 SLC1A4P43007 532 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 CXCR3P49682 368 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 TBL3Q12788 808 aaKnown RBP4.25□□□□□ -1.73
LINC00561-201ENST00000565815 FOXD4Q12950 439 aaPredicted RBP4.25□□□□□ -1.73
LINC00561-201ENST00000565815 GRIK3Q13003 919 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 IKQ13123 557 aaPredicted RBP4.25□□□□□ -1.73
LINC00561-201ENST00000565815 STXBP2Q15833 593 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 RPE65Q16518 533 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 NCAPH2Q6IBW4 605 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 CNPY4Q8N129 248 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 CSGALNACT2Q8N6G5 542 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 RMDN1Q96DB5 314 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 MYCBPQ99417 103 aaPredicted RBP4.25□□□□□ -1.73
LINC00561-201ENST00000565815 RAB34Q9BZG1 259 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 ZHX3Q9H4I2 956 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 SCPEP1Q9HB40 452 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 CDH22Q9UJ99 828 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 MTUS1Q9ULD2 1270 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 N4BP1O75113 896 aaKnown RBP4.25□□□□□ -1.73
LINC00561-201ENST00000565815 GFPT2O94808 682 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 LATS1O95835 1130 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 GNA11P29992 359 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 HOXC8P31273 242 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 MTIF2P46199 727 aaKnown RBP4.25□□□□□ -1.73
LINC00561-201ENST00000565815 TNNC1P63316 161 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 CUL1Q13616 776 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 BAATQ14032 418 aaPredicted RBP4.25□□□□□ -1.73
LINC00561-201ENST00000565815 BTG3Q14201 252 aaPredicted RBP4.25□□□□□ -1.73
LINC00561-201ENST00000565815 ERV3-1Q14264 604 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 HSP90AA4PQ58FG1 418 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 CFAP58Q5T655 872 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.25□□□□□ -1.73
LINC00561-201ENST00000565815 GUF1Q8N442 669 aaKnown RBP4.25□□□□□ -1.73
LINC00561-201ENST00000565815 TDRD5Q8NAT2 981 aaKnown RBP4.25□□□□□ -1.73
LINC00561-201ENST00000565815 SPATA4Q8NEY3 305 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 SEMA6DQ8NFY4 1073 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 MAGEC3Q8TD91 643 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 LRRC45Q96CN5 670 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 MSI2Q96DH6 328 aaKnown RBP4.25□□□□□ -1.73
LINC00561-201ENST00000565815 DYNLL2Q96FJ2 89 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 P2RY11Q96G91 374 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 CHP1Q99653 195 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 TSG101Q99816 390 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 CADM1Q9BY67 442 aaKnown RBP4.25□□□□□ -1.73
LINC00561-201ENST00000565815 TKTL2Q9H0I9 626 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 GDF3Q9NR23 364 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 MSRB1Q9NZV6 116 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 WNT16Q9UBV4 365 aa4.25□□□□□ -1.73
LINC00561-201ENST00000565815 MCM3APO60318 1980 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 GOLGA6L7A0A1B0GV03 622 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 GOLGA6L10A6NI86 522 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 RHODO00212 210 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 CYR61O00622 381 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 TSPAN3O60637 253 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 UBL4AP11441 157 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 CLDN2P57739 230 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 ARHGAP1Q07960 439 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 IFFO1Q0D2I5 559 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 ANGPT1Q15389 498 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 CCDC96Q2M329 555 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 C5orf22Q49AR2 442 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 MIDNQ504T8 468 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 SNX30Q5VWJ9 437 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 CENPPQ6IPU0 288 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 C8orf74Q6P047 294 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 NEK8Q86SG6 692 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 LURAP1LQ8IV03 231 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 DDIASQ8IXT1 998 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 CADM3Q8N126 398 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 TMEM105Q8N8V8 129 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 HSPH1Q92598 858 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 KAT2BQ92831 832 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 CALML4Q96GE6 196 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 CNOT6LQ96LI5 555 aaKnown RBP4.24□□□□□ -1.73
LINC00561-201ENST00000565815 S1PR5Q9H228 398 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 KAT14Q9H8E8 782 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 KRT84Q9NSB2 600 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 TMLHEQ9NVH6 421 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 LCMT1Q9UIC8 334 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 LAMP3Q9UQV4 416 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 TMEM98Q9Y2Y6 226 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 BZW2Q9Y6E2 419 aaKnown RBP4.24□□□□□ -1.73
LINC00561-201ENST00000565815 FAM169AQ9Y6X4 670 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 MYH4Q9Y623 1939 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 MASP2O00187 686 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 KIF1CO43896 1103 aaKnown RBP4.24□□□□□ -1.73
LINC00561-201ENST00000565815 HBP1O60381 514 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 OR52Z1P0C646 297 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 TSPY3P0CV98 308 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 TSPY8P0CW00 308 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 THPOP40225 353 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 HADHAP40939 763 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 NOVP48745 357 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 CYP2J2P51589 502 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 GSCP56915 257 aaPredicted RBP4.24□□□□□ -1.73
LINC00561-201ENST00000565815 GNGT1P63211 74 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 PDIA5Q14554 519 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms