RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 TNNT3P45378 269 aaPredicted RBP23.23■■□□□ 1.31
RAB40C-209ENST00000565511 EIF3EP60228 445 aaKnown RBP23.23■■□□□ 1.31
RAB40C-209ENST00000565511 COPS2P61201 443 aa23.23■■□□□ 1.31
RAB40C-209ENST00000565511 ITGA9Q13797 1035 aa23.23■■□□□ 1.31
RAB40C-209ENST00000565511 MAP7Q14244 749 aa23.23■■□□□ 1.31
RAB40C-209ENST00000565511 SPARCL1Q14515 664 aa23.23■■□□□ 1.31
RAB40C-209ENST00000565511 TAF1AQ15573 450 aaPredicted RBP23.23■■□□□ 1.31
RAB40C-209ENST00000565511 PTRH1Q86Y79 214 aaKnown RBP23.23■■□□□ 1.31
RAB40C-209ENST00000565511 RBM12BQ8IXT5 1001 aaKnown RBP23.23■■□□□ 1.31
RAB40C-209ENST00000565511 LRRC57Q8N9N7 239 aa23.23■■□□□ 1.31
RAB40C-209ENST00000565511 KIAA1143Q96AT1 154 aaPredicted RBP23.23■■□□□ 1.31
RAB40C-209ENST00000565511 PANX2Q96RD6 677 aa23.23■■□□□ 1.31
RAB40C-209ENST00000565511 WWP1Q9H0M0 922 aa23.23■■□□□ 1.31
RAB40C-209ENST00000565511 RBSNQ9H1K0 784 aa23.23■■□□□ 1.31
RAB40C-209ENST00000565511 SEMA5BQ9P283 1151 aa23.23■■□□□ 1.31
RAB40C-209ENST00000565511 HECTD1Q9ULT8 2610 aa23.23■■□□□ 1.31
RAB40C-209ENST00000565511 SPENQ96T58 3664 aaKnown RBP23.22■■□□□ 1.31
RAB40C-209ENST00000565511 GRID2IPA4D2P6 1211 aa23.22■■□□□ 1.31
RAB40C-209ENST00000565511 KCNN4O15554 427 aa23.22■■□□□ 1.31
RAB40C-209ENST00000565511 ANXA9O76027 345 aa23.22■■□□□ 1.31
RAB40C-209ENST00000565511 RBP3P10745 1247 aa23.22■■□□□ 1.31
RAB40C-209ENST00000565511 PYGMP11217 842 aa23.22■■□□□ 1.31
RAB40C-209ENST00000565511 MTHFD1P11586 935 aaKnown RBP23.22■■□□□ 1.31
RAB40C-209ENST00000565511 LPOP22079 712 aaPredicted RBP23.22■■□□□ 1.31
RAB40C-209ENST00000565511 HALP42357 657 aa23.22■■□□□ 1.31
RAB40C-209ENST00000565511 ZNF140P52738 457 aaPredicted RBP23.22■■□□□ 1.31
RAB40C-209ENST00000565511 CCDC181Q5TID7 509 aa23.22■■□□□ 1.31
RAB40C-209ENST00000565511 METRNLQ641Q3 311 aa23.22■■□□□ 1.31
RAB40C-209ENST00000565511 ITPRIPL1Q6GPH6 555 aa23.22■■□□□ 1.31
RAB40C-209ENST00000565511 CDKL3Q8IVW4 592 aaPredicted RBP23.22■■□□□ 1.31
RAB40C-209ENST00000565511 ESX1Q8N693 406 aa23.22■■□□□ 1.31
RAB40C-209ENST00000565511 RMDN2Q96LZ7 410 aa23.22■■□□□ 1.31
RAB40C-209ENST00000565511 RAB33BQ9H082 229 aa23.22■■□□□ 1.31
RAB40C-209ENST00000565511 ADNPQ9H2P0 1102 aa23.22■■□□□ 1.31
RAB40C-209ENST00000565511 FAM96AQ9H5X1 160 aa23.22■■□□□ 1.31
RAB40C-209ENST00000565511 IMP3Q9NV31 184 aaKnown RBP23.22■■□□□ 1.31
RAB40C-209ENST00000565511 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.22■■□□□ 1.31
RAB40C-209ENST00000565511 CROTQ9UKG9 612 aa23.22■■□□□ 1.31
RAB40C-209ENST00000565511 SPTBP11277 2137 aa23.21■■□□□ 1.31
RAB40C-209ENST00000565511 KCNJ13O60928 360 aa23.21■■□□□ 1.31
RAB40C-209ENST00000565511 SPAG6O75602 509 aa23.21■■□□□ 1.31
RAB40C-209ENST00000565511 SRP72O76094 671 aaKnown RBP23.21■■□□□ 1.31
RAB40C-209ENST00000565511 FURINP09958 794 aa23.21■■□□□ 1.31
RAB40C-209ENST00000565511 FGF5P12034 268 aa23.21■■□□□ 1.31
RAB40C-209ENST00000565511 FOLR1P15328 257 aa23.21■■□□□ 1.31
RAB40C-209ENST00000565511 NELFEP18615 380 aaKnown RBP23.21■■□□□ 1.31
RAB40C-209ENST00000565511 MSH3P20585 1137 aa23.21■■□□□ 1.31
RAB40C-209ENST00000565511 TMPRSS15P98073 1019 aa23.21■■□□□ 1.31
RAB40C-209ENST00000565511 DEFB109BQ30KR1 87 aa23.21■■□□□ 1.31
RAB40C-209ENST00000565511 C16orf46Q6P387 395 aa23.21■■□□□ 1.31
RAB40C-209ENST00000565511 C6orf15Q6UXA7 325 aaPredicted RBP23.21■■□□□ 1.31
RAB40C-209ENST00000565511 ZDHHC12Q96GR4 267 aa23.21■■□□□ 1.31
RAB40C-209ENST00000565511 SLC41A2Q96JW4 573 aa23.21■■□□□ 1.31
RAB40C-209ENST00000565511 PPM1MQ96MI6 270 aa23.21■■□□□ 1.31
RAB40C-209ENST00000565511 SPATA13Q96N96 652 aa23.21■■□□□ 1.31
RAB40C-209ENST00000565511 NRTNQ99748 197 aa23.21■■□□□ 1.31
RAB40C-209ENST00000565511 MAP3K3Q99759 626 aa23.21■■□□□ 1.31
RAB40C-209ENST00000565511 TRIT1Q9H3H1 467 aaKnown RBP23.21■■□□□ 1.31
RAB40C-209ENST00000565511 CLMPQ9H6B4 373 aa23.21■■□□□ 1.31
RAB40C-209ENST00000565511 ASB8Q9H765 288 aa23.21■■□□□ 1.31
RAB40C-209ENST00000565511 PIKFYVEQ9Y2I7 2098 aa23.21■■□□□ 1.31
RAB40C-209ENST00000565511 NBASA2RRP1 2371 aa23.21■■□□□ 1.31
RAB40C-209ENST00000565511 GOLGA6L3A6NEY3 463 aa23.2■■□□□ 1.3
RAB40C-209ENST00000565511 PRSS56P0CW18 603 aa23.2■■□□□ 1.3
RAB40C-209ENST00000565511 SFTPCP11686 197 aa23.2■■□□□ 1.3
RAB40C-209ENST00000565511 DLSTP36957 453 aa23.2■■□□□ 1.3
RAB40C-209ENST00000565511 CCR10P46092 362 aa23.2■■□□□ 1.3
RAB40C-209ENST00000565511 ARCN1P48444 511 aaKnown RBP23.2■■□□□ 1.3
RAB40C-209ENST00000565511 DARS2Q6PI48 645 aaKnown RBP23.2■■□□□ 1.3
RAB40C-209ENST00000565511 TMEM135Q86UB9 458 aa23.2■■□□□ 1.3
RAB40C-209ENST00000565511 RASGRP3Q8IV61 690 aa23.2■■□□□ 1.3
RAB40C-209ENST00000565511 KLHDC8BQ8IXV7 354 aa23.2■■□□□ 1.3
RAB40C-209ENST00000565511 RUFY1Q96T51 708 aa23.2■■□□□ 1.3
RAB40C-209ENST00000565511 LNPEPQ9UIQ6 1025 aa23.2■■□□□ 1.3
RAB40C-209ENST00000565511 EFR3BQ9Y2G0 817 aa23.2■■□□□ 1.3
RAB40C-209ENST00000565511 DNMT3AQ9Y6K1 912 aaPredicted RBP23.2■■□□□ 1.3
RAB40C-209ENST00000565511 MGAT4DA6NG13 374 aa23.19■■□□□ 1.3
RAB40C-209ENST00000565511 AGAP14A8MT82 685 aa23.19■■□□□ 1.3
RAB40C-209ENST00000565511 BTNL10A8MVZ5 291 aa23.19■■□□□ 1.3
RAB40C-209ENST00000565511 EBLN1P0CF75 366 aa23.19■■□□□ 1.3
RAB40C-209ENST00000565511 CDKN1CP49918 316 aaPredicted RBP23.19■■□□□ 1.3
RAB40C-209ENST00000565511 IL11RAQ14626 422 aa23.19■■□□□ 1.3
RAB40C-209ENST00000565511 LONRF2Q1L5Z9 754 aa23.19■■□□□ 1.3
RAB40C-209ENST00000565511 BCL7AQ4VC05 210 aa23.19■■□□□ 1.3
RAB40C-209ENST00000565511 FBXO38Q6PIJ6 1188 aa23.19■■□□□ 1.3
RAB40C-209ENST00000565511 ATG14Q6ZNE5 492 aa23.19■■□□□ 1.3
RAB40C-209ENST00000565511 MRFAP1L1Q96HT8 127 aa23.19■■□□□ 1.3
RAB40C-209ENST00000565511 C12orf66Q96MD2 445 aa23.19■■□□□ 1.3
RAB40C-209ENST00000565511 CATSPER2Q96P56 530 aa23.19■■□□□ 1.3
RAB40C-209ENST00000565511 TBL1YQ9BQ87 522 aa23.19■■□□□ 1.3
RAB40C-209ENST00000565511 AKIRIN1Q9H9L7 192 aaPredicted RBP23.19■■□□□ 1.3
RAB40C-209ENST00000565511 PACSIN2Q9UNF0 486 aaPredicted RBP23.19■■□□□ 1.3
RAB40C-209ENST00000565511 PTPN13Q12923 2485 aa23.18■■□□□ 1.3
RAB40C-209ENST00000565511 OR5K3A6NET4 321 aa23.18■■□□□ 1.3
RAB40C-209ENST00000565511 C2orf81A6NN90 581 aa23.18■■□□□ 1.3
RAB40C-209ENST00000565511 CYSRT1A8MQ03 144 aa23.18■■□□□ 1.3
RAB40C-209ENST00000565511 TCN2P20062 427 aa23.18■■□□□ 1.3
RAB40C-209ENST00000565511 RWDD2BP57060 319 aa23.18■■□□□ 1.3
RAB40C-209ENST00000565511 KCNC4Q03721 635 aa23.18■■□□□ 1.3
RAB40C-209ENST00000565511 PLCL1Q15111 1095 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms