RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 FAM124BQ9H5Z6 455 aaPredicted RBP20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 ACTR8Q9H981 624 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 SP110Q9HB58 689 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.23■□□□□ 0.834e-7■■■□□ 17.4
MAP1LC3B-206ENST00000564844 CD274Q9NZQ7 290 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 ANGPTL1O95841 491 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 S100BP04271 92 aaPredicted RBP20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 BRCC3P46736 316 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 NEK2P51955 445 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 ALFQ53S48 1182 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 PLEKHG7Q6ZR37 379 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 SPATC1Q76KD6 591 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 SCN4BQ8IWT1 228 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 OR2T12Q8NG77 320 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 GPR152Q8TDT2 470 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 FAR1Q8WVX9 515 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 HDAC2Q92769 488 aaKnown RBP20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 MUL1Q969V5 352 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 SLC47A1Q96FL8 570 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 CGREF1Q99674 301 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 TPK1Q9H3S4 243 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 SCUBE2Q9NQ36 999 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 NOX1Q9Y5S8 564 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 E9PAM4 449 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 CHEK2O96017 543 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 EPHA2P29317 976 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 EEFSECP57772 596 aaKnown RBP20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 TUBA3CQ13748 450 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 NPTX1Q15818 432 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 RBM48Q5RL73 367 aaKnown RBP20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 METTL6Q8TCB7 284 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 COMMD8Q9NX08 183 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 ZNF639Q9UID6 485 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 B3GNT3Q9Y2A9 372 aa20.23■□□□□ 0.83
MAP1LC3B-206ENST00000564844 DNAJC25-GNG10A0A024R161 153 aa20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 OR1I1O60431 355 aa20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 OR4Q2P0C623 313 aa20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 RPS12P25398 132 aaKnown RBP20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 HTR1EP28566 365 aa20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 BEX3Q00994 111 aa20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 LAIR1Q6GTX8 287 aa20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 DLEU7Q6UYE1 221 aa20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 SYTL1Q8IYJ3 562 aa20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 PAPD5Q8NDF8 572 aaKnown RBP20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 ITPKCQ96DU7 683 aa20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 SEMA3CQ99985 751 aa20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 MIOSQ9NXC5 875 aa20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 HHLA1C9JL84 531 aa20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 PRMT5O14744 637 aaPredicted RBP20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 TREHO43280 583 aa20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 LDB2O43679 373 aa20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 C7P10643 843 aa20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 AIF1P55008 147 aa20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 RFTN2Q52LD8 501 aaPredicted RBP20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 Q6ZSR9 355 aa20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 FRA10AC1Q70Z53 315 aa20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 TOP6BLQ8N6T0 577 aa20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 SIDT2Q8NBJ9 832 aaKnown RBP20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 MTFMTQ96DP5 389 aaKnown RBP20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 NSMCE3Q96MG7 304 aa20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 WDR12Q9GZL7 423 aaKnown RBP20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 CATSPERBQ9H7T0 1116 aa20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 BPIFA1Q9NP55 256 aa20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 HS3ST4Q9Y661 456 aa20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 PRRC2BQ5JSZ5 2229 aaKnown RBP20.22■□□□□ 0.83
MAP1LC3B-206ENST00000564844 NIPSNAP2O75323 286 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 GUCA1CO95843 209 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 LCKP06239 509 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 SPNP16150 400 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 ISL1P61371 349 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 SNX17Q15036 470 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 SOWAHCQ53LP3 525 aaPredicted RBP20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 ATAD3BQ5T9A4 648 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 DEPDC1Q5TB30 811 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 CCDC80Q76M96 950 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 ANKRD46Q86W74 232 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 PROSER1Q86XN7 944 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 FAM83FQ8NEG4 500 aaPredicted RBP20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 PPTC7Q8NI37 304 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 ZNF583Q96ND8 569 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 SLC25A51Q9H1U9 297 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 F8W810 466 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 TBX18O95935 607 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 CAPN1P07384 714 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 ENO2P09104 434 aaPredicted RBP20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 FDXRP22570 491 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 PLD3Q8IV08 490 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 MFSD4AQ8N468 514 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 STAG3L4Q8TBR4 150 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 PTCD2Q8WV60 388 aaKnown RBP20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 LINC00854A0A1B0GVQ3 168 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 DBTP11182 482 aaKnown RBP20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 SLC2A4P14672 509 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 SMPD1P17405 629 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 DGUOKQ16854 277 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 UBXN11Q5T124 520 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 ZNF540Q8NDQ6 660 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 OSBPL10Q9BXB5 764 aa20.21■□□□□ 0.83
MAP1LC3B-206ENST00000564844 PSME4Q14997 1843 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms