RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 HRASLS2Q9NWW9 162 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 UBP1Q9NZI7 540 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 HACD3Q9P035 362 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 IL17CQ9P0M4 197 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 FAM153AQ9UHL3 310 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 FARSAQ9Y285 508 aaKnown RBP13.77□□□□□ -0.21
CDR2-204ENST00000564542 ICE1Q9Y2F5 2266 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 MAP4K5Q9Y4K4 846 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 DNMT3AQ9Y6K1 912 aaPredicted RBP13.77□□□□□ -0.21
CDR2-204ENST00000564542 GLYATL1P3A0A0U1RQE8 302 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 OR2AG2A6NM03 316 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 ZBTB11O95625 1053 aaPredicted RBP13.76□□□□□ -0.21
CDR2-204ENST00000564542 EPOP01588 193 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 KRT1P04264 644 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 LPOP22079 712 aaPredicted RBP13.76□□□□□ -0.21
CDR2-204ENST00000564542 TNNT3P45378 269 aaPredicted RBP13.76□□□□□ -0.21
CDR2-204ENST00000564542 WNT3AP56704 352 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 DYNLT1P63172 113 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 GPS2Q13227 327 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 XRCC4Q13426 336 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 ITGA9Q13797 1035 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 NOMO1Q15155 1222 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 GPR19Q15760 415 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 CHRNA6Q15825 494 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 PPP2R5EQ16537 467 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 SIRPB2Q5JXA9 342 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 GPRC6AQ5T6X5 926 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 LRRC38Q5VT99 294 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 METRNLQ641Q3 311 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 CAVIN1Q6NZI2 390 aaKnown RBP13.76□□□□□ -0.21
CDR2-204ENST00000564542 KDELC1Q6UW63 502 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 B4GALNT4Q76KP1 1039 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 RFX6Q8HWS3 928 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 ZFPM2Q8WW38 1151 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 MR1Q95460 341 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 ZNF501Q96CX3 271 aaPredicted RBP13.76□□□□□ -0.21
CDR2-204ENST00000564542 LRFN5Q96NI6 719 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 LATS2Q9NRM7 1088 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 KCND1Q9NSA2 647 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 CUEDC1Q9NWM3 386 aaPredicted RBP13.76□□□□□ -0.21
CDR2-204ENST00000564542 BTRCQ9Y297 605 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 PCDHGB7Q9Y5F8 929 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 MYO9AB2RTY4 2548 aa13.76□□□□□ -0.21
CDR2-204ENST00000564542 NOTCH2Q04721 2471 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 RP1L1Q8IWN7 2480 aaPredicted RBP13.75□□□□□ -0.21
CDR2-204ENST00000564542 SHANK1Q9Y566 2161 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 GAPDHSO14556 408 aaPredicted RBP13.75□□□□□ -0.21
CDR2-204ENST00000564542 UGT1A9O60656 530 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 CEACAM4O75871 244 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 UGT1A6P19224 532 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 NFKB1P19838 968 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 UGT1A1P22309 533 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 UGT1A4P22310 534 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 PBLDP30039 288 aaPredicted RBP13.75□□□□□ -0.21
CDR2-204ENST00000564542 CD68P34810 354 aaPredicted RBP13.75□□□□□ -0.21
CDR2-204ENST00000564542 ARHGAP25P42331 645 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 PTGIRP43119 386 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 NR2C2P49116 596 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 CCL11P51671 97 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 GSDMDP57764 484 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 LONRF2Q1L5Z9 754 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 ASTE1Q2TB18 679 aaPredicted RBP13.75□□□□□ -0.21
CDR2-204ENST00000564542 TMTC4Q5T4D3 741 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 HIST2H2BCQ6DN03 193 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 TMEM220Q6QAJ8 160 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 BZW1Q7L1Q6 419 aaKnown RBP13.75□□□□□ -0.21
CDR2-204ENST00000564542 GLT6D1Q7Z4J2 308 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 LUZP1Q86V48 1076 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 BEND7Q8N7W2 519 aaPredicted RBP13.75□□□□□ -0.21
CDR2-204ENST00000564542 SLC38A9Q8NBW4 561 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 SLC35G2Q8TBE7 412 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 ADAMTS17Q8TE56 1095 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 TFB1MQ8WVM0 346 aaKnown RBP13.75□□□□□ -0.21
CDR2-204ENST00000564542 CHST8Q9H2A9 424 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 UGT1A7Q9HAW7 530 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 UGT1A10Q9HAW8 530 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 UGT1A8Q9HAW9 530 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 SOHLH2Q9NX45 425 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 SLC24A2Q9UI40 661 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 SNX7Q9UNH6 387 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 PKP3Q9Y446 797 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 ZNF451Q9Y4E5 1061 aa13.75□□□□□ -0.21
CDR2-204ENST00000564542 CFAP20Q9Y6A4 193 aaKnown RBP13.75□□□□□ -0.21
CDR2-204ENST00000564542 SSU72P8A0A1W2PR75 194 aa13.74□□□□□ -0.21
CDR2-204ENST00000564542 KLHL33A6NCF5 533 aa13.74□□□□□ -0.21
CDR2-204ENST00000564542 SEMA7AO75326 666 aa13.74□□□□□ -0.21
CDR2-204ENST00000564542 KLK3P07288 261 aaPredicted RBP13.74□□□□□ -0.21
CDR2-204ENST00000564542 RAB40ALP0C0E4 278 aa13.74□□□□□ -0.21
CDR2-204ENST00000564542 HLA-DPA1P20036 260 aa13.74□□□□□ -0.21
CDR2-204ENST00000564542 AKT1P31749 480 aa13.74□□□□□ -0.21
CDR2-204ENST00000564542 CA5AP35218 305 aa13.74□□□□□ -0.21
CDR2-204ENST00000564542 CHRNA4P43681 627 aa13.74□□□□□ -0.21
CDR2-204ENST00000564542 WASHC5Q12768 1159 aa13.74□□□□□ -0.21
CDR2-204ENST00000564542 SLC1A5Q15758 541 aa13.74□□□□□ -0.21
CDR2-204ENST00000564542 ODF2Q5BJF6 829 aa13.74□□□□□ -0.21
CDR2-204ENST00000564542 FNBP1LQ5T0N5 605 aa13.74□□□□□ -0.21
CDR2-204ENST00000564542 ARMC6Q6NXE6 501 aa13.74□□□□□ -0.21
CDR2-204ENST00000564542 DUS1LQ6P1R4 473 aaKnown RBP13.74□□□□□ -0.21
CDR2-204ENST00000564542 HPS6Q86YV9 775 aa13.74□□□□□ -0.21
CDR2-204ENST00000564542 DSELQ8IZU8 1212 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms