RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 CHRNA6Q15825 494 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 UGT8Q16880 541 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 LRRC38Q5VT99 294 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 GLT6D1Q7Z4J2 308 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 RHOT2Q8IXI1 618 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 RHOT1Q8IXI2 618 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 RASGEF1AQ8N9B8 481 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 OR8K1Q8NGG5 319 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 GPR150Q8NGU9 434 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 DTX3LQ8TDB6 740 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 BLOC1S5Q8TDH9 187 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 KCND1Q9NSA2 647 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 KLHL8Q9P2G9 620 aaPredicted RBP20.43■□□□□ 0.86
HERC2-204ENST00000563945 SCRG1O75711 98 aa20.42■□□□□ 0.86
HERC2-204ENST00000563945 EPOP01588 193 aa20.42■□□□□ 0.86
HERC2-204ENST00000563945 HNRNPH3P31942 346 aaKnown RBP20.42■□□□□ 0.86
HERC2-204ENST00000563945 TUBB4BP68371 445 aa20.42■□□□□ 0.86
HERC2-204ENST00000563945 TUBB2AQ13885 445 aa20.42■□□□□ 0.86
HERC2-204ENST00000563945 NFE2L1Q14494 772 aa20.42■□□□□ 0.86
HERC2-204ENST00000563945 GSE1Q14687 1217 aa20.42■□□□□ 0.86
HERC2-204ENST00000563945 SIRPB2Q5JXA9 342 aa20.42■□□□□ 0.86
HERC2-204ENST00000563945 PID1Q7Z2X4 250 aa20.42■□□□□ 0.86
HERC2-204ENST00000563945 GALNT11Q8NCW6 608 aa20.42■□□□□ 0.86
HERC2-204ENST00000563945 OR8K5Q8NH50 307 aa20.42■□□□□ 0.86
HERC2-204ENST00000563945 CPT1CQ8TCG5 803 aa20.42■□□□□ 0.86
HERC2-204ENST00000563945 ZFPM2Q8WW38 1151 aa20.42■□□□□ 0.86
HERC2-204ENST00000563945 C12orf66Q96MD2 445 aa20.42■□□□□ 0.86
HERC2-204ENST00000563945 TUBB2BQ9BVA1 445 aa20.42■□□□□ 0.86
HERC2-204ENST00000563945 SOHLH2Q9NX45 425 aa20.42■□□□□ 0.86
HERC2-204ENST00000563945 IL17CQ9P0M4 197 aa20.42■□□□□ 0.86
HERC2-204ENST00000563945 LOC285095A0A1B0GVY8 99 aa20.41■□□□□ 0.86
HERC2-204ENST00000563945 SYCE3A1L190 88 aa20.41■□□□□ 0.86
HERC2-204ENST00000563945 OR5K3A6NET4 321 aa20.41■□□□□ 0.86
HERC2-204ENST00000563945 ARGFXA6NJG6 315 aa20.41■□□□□ 0.86
HERC2-204ENST00000563945 STX7O15400 261 aaKnown RBP20.41■□□□□ 0.86
HERC2-204ENST00000563945 ZBTB11O95625 1053 aaPredicted RBP20.41■□□□□ 0.86
HERC2-204ENST00000563945 TPM1P09493 284 aa20.41■□□□□ 0.86
HERC2-204ENST00000563945 MTHFD1P11586 935 aaKnown RBP20.41■□□□□ 0.86
HERC2-204ENST00000563945 NFKB1P19838 968 aa20.41■□□□□ 0.86
HERC2-204ENST00000563945 SLC1A1P43005 524 aa20.41■□□□□ 0.86
HERC2-204ENST00000563945 RPS18P62269 152 aaKnown RBP20.41■□□□□ 0.86
HERC2-204ENST00000563945 PRKAA1Q13131 559 aa20.41■□□□□ 0.86
HERC2-204ENST00000563945 FNBP1LQ5T0N5 605 aa20.41■□□□□ 0.86
HERC2-204ENST00000563945 GPRC6AQ5T6X5 926 aa20.41■□□□□ 0.86
HERC2-204ENST00000563945 KAZNQ674X7 775 aa20.41■□□□□ 0.86
HERC2-204ENST00000563945 D2HGDHQ8N465 521 aa20.41■□□□□ 0.86
HERC2-204ENST00000563945 DDHD1Q8NEL9 900 aa20.41■□□□□ 0.86
HERC2-204ENST00000563945 TRIM55Q9BYV6 548 aa20.41■□□□□ 0.86
HERC2-204ENST00000563945 ING2Q9H160 280 aa20.41■□□□□ 0.86
HERC2-204ENST00000563945 AKIRIN1Q9H9L7 192 aaPredicted RBP20.41■□□□□ 0.86
HERC2-204ENST00000563945 FANCEQ9HB96 536 aa20.41■□□□□ 0.86
HERC2-204ENST00000563945 ACSL5Q9ULC5 683 aa20.41■□□□□ 0.86
HERC2-204ENST00000563945 CFAP20Q9Y6A4 193 aaKnown RBP20.41■□□□□ 0.86
HERC2-204ENST00000563945 COLEC10Q9Y6Z7 277 aa20.41■□□□□ 0.86
HERC2-204ENST00000563945 SPTBN1Q01082 2364 aaKnown RBP20.41■□□□□ 0.86
HERC2-204ENST00000563945 SSU72P8A0A1W2PR75 194 aa20.4■□□□□ 0.86
HERC2-204ENST00000563945 KLHL33A6NCF5 533 aa20.4■□□□□ 0.86
HERC2-204ENST00000563945 OR6C74A6NCV1 312 aa20.4■□□□□ 0.86
HERC2-204ENST00000563945 MAP3K7O43318 606 aa20.4■□□□□ 0.86
HERC2-204ENST00000563945 BUD23O43709 281 aaKnown RBP20.4■□□□□ 0.86
HERC2-204ENST00000563945 SPOPO43791 374 aa20.4■□□□□ 0.86
HERC2-204ENST00000563945 HLA-DPA1P20036 260 aa20.4■□□□□ 0.86
HERC2-204ENST00000563945 CTSCP53634 463 aa20.4■□□□□ 0.86
HERC2-204ENST00000563945 GSDMDP57764 484 aa20.4■□□□□ 0.86
HERC2-204ENST00000563945 SPTAN1Q13813 2472 aaKnown RBP20.4■□□□□ 0.86
HERC2-204ENST00000563945 NOMO1Q15155 1222 aa20.4■□□□□ 0.86
HERC2-204ENST00000563945 METRNLQ641Q3 311 aa20.4■□□□□ 0.86
HERC2-204ENST00000563945 MFSD7Q6UXD7 560 aa20.4■□□□□ 0.86
HERC2-204ENST00000563945 CERS6Q6ZMG9 384 aa20.4■□□□□ 0.86
HERC2-204ENST00000563945 FAM83HQ6ZRV2 1179 aaPredicted RBP20.4■□□□□ 0.86
HERC2-204ENST00000563945 IPMKQ8NFU5 416 aa20.4■□□□□ 0.86
HERC2-204ENST00000563945 CCDC42Q96M95 316 aa20.4■□□□□ 0.86
HERC2-204ENST00000563945 RUFY1Q96T51 708 aa20.4■□□□□ 0.86
HERC2-204ENST00000563945 FSD1LQ9BXM9 530 aa20.4■□□□□ 0.86
HERC2-204ENST00000563945 WWP1Q9H0M0 922 aa20.4■□□□□ 0.86
HERC2-204ENST00000563945 SAE1Q9UBE0 346 aaPredicted RBP20.4■□□□□ 0.86
HERC2-204ENST00000563945 SNX7Q9UNH6 387 aa20.4■□□□□ 0.86
HERC2-204ENST00000563945 PCDHGA9Q9Y5G4 932 aaKnown RBP20.4■□□□□ 0.86
HERC2-204ENST00000563945 MGAT4DA6NG13 374 aa20.39■□□□□ 0.85
HERC2-204ENST00000563945 CST8O60676 142 aa20.39■□□□□ 0.85
HERC2-204ENST00000563945 PDGFAP04085 211 aa20.39■□□□□ 0.85
HERC2-204ENST00000563945 SLC35G4P0C7Q5 338 aa20.39■□□□□ 0.85
HERC2-204ENST00000563945 PYGMP11217 842 aa20.39■□□□□ 0.85
HERC2-204ENST00000563945 GNLYP22749 145 aa20.39■□□□□ 0.85
HERC2-204ENST00000563945 CHRNA4P43681 627 aa20.39■□□□□ 0.85
HERC2-204ENST00000563945 CHAF1BQ13112 559 aa20.39■□□□□ 0.85
HERC2-204ENST00000563945 PRKD1Q15139 912 aaPredicted RBP20.39■□□□□ 0.85
HERC2-204ENST00000563945 GPR19Q15760 415 aa20.39■□□□□ 0.85
HERC2-204ENST00000563945 KDELC1Q6UW63 502 aa20.39■□□□□ 0.85
HERC2-204ENST00000563945 DET1Q7L5Y6 550 aa20.39■□□□□ 0.85
HERC2-204ENST00000563945 CARFQ8N187 725 aa20.39■□□□□ 0.85
HERC2-204ENST00000563945 ZNF398Q8TD17 642 aa20.39■□□□□ 0.85
HERC2-204ENST00000563945 CPT1BQ92523 772 aa20.39■□□□□ 0.85
HERC2-204ENST00000563945 P3H4Q92791 437 aa20.39■□□□□ 0.85
HERC2-204ENST00000563945 INSM2Q96T92 566 aaPredicted RBP20.39■□□□□ 0.85
HERC2-204ENST00000563945 VAT1Q99536 393 aa20.39■□□□□ 0.85
HERC2-204ENST00000563945 SLC7A5P2Q9GIP4 190 aa20.39■□□□□ 0.85
HERC2-204ENST00000563945 FAM8A1Q9UBU6 413 aa20.39■□□□□ 0.85
HERC2-204ENST00000563945 ZNF451Q9Y4E5 1061 aa20.39■□□□□ 0.85
HERC2-204ENST00000563945 USP9XQ93008 2570 aaPredicted RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms