RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 CRTC3Q6UUV7 619 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 RPTNQ6XPR3 784 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 RFX8Q6ZV50 586 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 CARFQ8N187 725 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 C3orf20Q8ND61 904 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 DNAJB14Q8TBM8 379 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 COG1Q8WTW3 980 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 EID2BQ96D98 161 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 CLIP3Q96DZ5 547 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 TIGD1Q96MW7 591 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 TAAR6Q96RI8 345 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 PEBP4Q96S96 227 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 PCDHB18PQ96TA0 734 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 TREX2Q9BQ50 279 aaPredicted RBP7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 DHRS4Q9BTZ2 278 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 SELENOOQ9BVL4 669 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 FAM83DQ9H4H8 585 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 ACTR5Q9H9F9 607 aaPredicted RBP7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 OLAHQ9NV23 265 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 NEU2Q9Y3R4 380 aa7.52□□□□□ -1.21
HERPUD1-206ENST00000563343 HRNRQ86YZ3 2850 aaPredicted RBP7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 RTTNQ86VV8 2226 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 PDZK1P1A8MUH7 402 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 EIF3CLB5ME19 914 aaKnown RBP7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 F8VZ95 297 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 H3BMH7 237 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 CCL21O00585 134 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 LDB2O43679 373 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 MTA2O94776 668 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 IGHEP01854 428 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 UMODP07911 640 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 PBX1P40424 430 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 ARL4DP49703 201 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 KPNA2P52292 529 aaKnown RBP7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 ART1P52961 327 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 Q0VFX4 171 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 DPYSQ14117 519 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 TDRD12Q587J7 1177 aaKnown RBP7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 KLHDC7AQ5VTJ3 777 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 ALG1LQ6GMV1 187 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 FAM180AQ6UWF9 173 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 MON1BQ7L1V2 547 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 LRRTM4Q86VH4 590 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 ZNF677Q86XU0 584 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 ELOA2Q8IYF1 753 aaPredicted RBP7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 TEX26Q8N6G2 289 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 BCORP1Q8N888 145 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 NR4A3Q92570 626 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 CXorf40BQ96DE9 158 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 EIF3CQ99613 913 aaKnown RBP7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 DPH2Q9BQC3 489 aaPredicted RBP7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 CNPY3Q9BT09 278 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 SNRNP25Q9BV90 132 aaKnown RBP7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 TLR10Q9BXR5 811 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 TDRD1Q9BXT4 1180 aaKnown RBP7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 ENKD1Q9H0I2 346 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 VPS16Q9H269 839 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 CXXC4Q9H2H0 198 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 GSX1Q9H4S2 264 aaPredicted RBP7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 DHX35Q9H5Z1 703 aaKnown RBP7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 ATP13A2Q9NQ11 1180 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 DLL4Q9NR61 685 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 CWC15Q9P013 229 aaKnown RBP7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 SUCOQ9UBS9 1254 aaKnown RBP7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 TMPRSS11EQ9UL52 423 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 CHKBQ9Y259 395 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 PADI2Q9Y2J8 665 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 VPS13CQ709C8 3753 aa7.51□□□□□ -1.21
HERPUD1-206ENST00000563343 UBA6A0AVT1 1052 aaPredicted RBP7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 RGSL1A5PLK6 1076 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 AGPSO00116 658 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 PEX12O00623 359 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 VEGFDO43915 354 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 ALOX12BO75342 701 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 MTX2O75431 263 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 SLC25A14O95258 325 aaPredicted RBP7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 FGFR1OPO95684 399 aaKnown RBP7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 UCHL3P15374 230 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 AGAP20933 346 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 IDSP22304 550 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 MMP13P45452 471 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 ARCN1P48444 511 aaKnown RBP7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 HCAR3P49019 387 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 AIMP2Q13155 320 aaKnown RBP7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 TLR1Q15399 786 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 ASIC2Q16515 512 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 RPE65Q16518 533 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 MRPL14Q6P1L8 145 aaKnown RBP7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 KLHL35Q6PF15 583 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 PHF13Q86YI8 300 aaPredicted RBP7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 TGIF2LYQ8IUE0 185 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 NDUFAF2Q8N183 169 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 GPR26Q8NDV2 337 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 CATSPER1Q8NEC5 780 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 OR2Y1Q8NGV0 311 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 GLYATL1Q969I3 302 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 MTFMTQ96DP5 389 aaKnown RBP7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 MCEEQ96PE7 176 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 SPOCK3Q9BQ16 436 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 TMEM121Q9BTD3 319 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms