RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 MFHAS1Q9Y4C4 1052 aa4.72□□□□□ -1.65
SMG1-207ENST00000563235 PUS1Q9Y606 427 aaKnown RBP eCLIP4.72□□□□□ -1.65
SMG1-207ENST00000563235 FAM237AA0A1B0GTK4 181 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 OR6C70A6NIJ9 312 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 FAM90A7PA6NKC0 464 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 ANXA2P2A6NMY6 339 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 C4orf47A7E2U8 309 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 FAM90A22PA8MWA6 464 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 FAM90A12PA8MX19 464 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 FAM90A23PA8MXZ1 464 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 RNF225M0QZC1 329 aaPredicted RBP4.71□□□□□ -1.66
SMG1-207ENST00000563235 NR5A2O00482 541 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 WNT7AO00755 349 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 GRM6O15303 877 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 DYRK3O43781 588 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 BNIP3LO60238 219 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 SNNO75324 88 aaPredicted RBP4.71□□□□□ -1.66
SMG1-207ENST00000563235 NDUFS3O75489 264 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 UFL1O94874 794 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 PRSS23O95084 383 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 ABHD16AO95870 558 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 MBP02144 154 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 ENO1P06733 434 aaKnown RBP4.71□□□□□ -1.66
SMG1-207ENST00000563235 EZRP15311 586 aaKnown RBP4.71□□□□□ -1.66
SMG1-207ENST00000563235 YWHAQP27348 245 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 CD40LGP29965 261 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 CASRP41180 1078 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 PHKA2P46019 1235 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 ATP2C1P98194 919 aaPredicted RBP4.71□□□□□ -1.66
SMG1-207ENST00000563235 TARDBPQ13148 414 aaKnown RBP eCLIP4.71□□□□□ -1.66
SMG1-207ENST00000563235 KCNAB1Q14722 419 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 NKG7Q16617 165 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 HIF1AQ16665 826 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 WSCD1Q658N2 575 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 NCAPH2Q6IBW4 605 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 DUS1LQ6P1R4 473 aaKnown RBP4.71□□□□□ -1.66
SMG1-207ENST00000563235 ERASQ7Z444 233 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 HAUS6Q7Z4H7 955 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 VN1R5Q7Z5H4 357 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 CLVS1Q8IUQ0 354 aaPredicted RBP4.71□□□□□ -1.66
SMG1-207ENST00000563235 PIGBQ92521 554 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 WDR89Q96FK6 387 aaPredicted RBP4.71□□□□□ -1.66
SMG1-207ENST00000563235 CEP19Q96LK0 163 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 PCYT2Q99447 389 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 NUP58Q9BVL2 599 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 DDX47Q9H0S4 455 aaKnown RBP4.71□□□□□ -1.66
SMG1-207ENST00000563235 MED20Q9H944 212 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 USP29Q9HBJ7 922 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 KLHL28Q9NXS3 571 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 VSX1Q9NZR4 365 aaPredicted RBP4.71□□□□□ -1.66
SMG1-207ENST00000563235 ONECUT1Q9UBC0 465 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 CNTN6Q9UQ52 1028 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 SAMHD1Q9Y3Z3 626 aaKnown RBP4.71□□□□□ -1.66
SMG1-207ENST00000563235 PCDHA2Q9Y5H9 948 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 GLI3P10071 1580 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 NUP188Q5SRE5 1749 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 LRRIQ1Q96JM4 1722 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 DLC1Q96QB1 1528 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 SYCP2Q9BX26 1530 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 A0A1W2PQM1 296 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 BCLAF3A2AJT9 711 aaKnown RBP4.71□□□□□ -1.66
SMG1-207ENST00000563235 RAB19A4D1S5 217 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 SLC35F4A4IF30 521 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 ANKDD1BA6NHY2 528 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 MEFVO15553 781 aaPredicted RBP4.71□□□□□ -1.66
SMG1-207ENST00000563235 DHX15O43143 795 aaKnown RBP4.71□□□□□ -1.66
SMG1-207ENST00000563235 ADCY6O43306 1168 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 ECE2O60344 883 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 ADAM11O75078 769 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 GPR32O75388 356 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 KRT36O76013 467 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 SLC16A8O95907 504 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 GNAI2P04899 355 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 DARSP14868 501 aaKnown RBP4.71□□□□□ -1.66
SMG1-207ENST00000563235 NCF2P19878 526 aaPredicted RBP4.71□□□□□ -1.66
SMG1-207ENST00000563235 MAGP20916 626 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 HLA-FP30511 346 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 SLC26A3P40879 764 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 PTENP60484 403 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 B4GALNT1Q00973 533 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 GLO1Q04760 184 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 IL18Q14116 193 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 TMEM132BQ14DG7 1078 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 KIZQ2M2Z5 673 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 KLHL26Q53HC5 615 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 TEX44Q53QW1 395 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 C9orf50Q5SZB4 431 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 MARCH8Q5T0T0 291 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 DCAF12L1Q5VU92 463 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 MBLAC2Q68D91 279 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 FAM171BQ6P995 826 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 PAOXQ6QHF9 649 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 RSPO2Q6UXX9 243 aaPredicted RBP4.71□□□□□ -1.66
SMG1-207ENST00000563235 SLC30A10Q6XR72 485 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 ZNF677Q86XU0 584 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 MCATQ8IVS2 390 aaKnown RBP4.71□□□□□ -1.66
SMG1-207ENST00000563235 ELMOD3Q96FG2 381 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 DUS3LQ96G46 650 aaKnown RBP4.71□□□□□ -1.66
SMG1-207ENST00000563235 ZSWIM3Q96MP5 696 aa4.71□□□□□ -1.66
SMG1-207ENST00000563235 GPR20Q99678 358 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms