RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 FLT1P17948 1338 aa3.18□□□□□ -1.9
SHCBP1-202ENST00000563219 LOC100509620A0A075B734 347 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 EDDM13A0A1B0GTR0 161 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 MAGEA13PA6NCF6 341 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 EIF4E1BA6NMX2 242 aaKnown RBP3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 MAGEB17A8MXT2 336 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 FAM90A26D6RGX4 464 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 H0YAE9 185 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 H0YIN7 160 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 ACOT8O14734 319 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 SMAD9O15198 467 aaKnown RBP3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 IPO8O15397 1037 aaKnown RBP3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 KCNN4O15554 427 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 KRT86O43790 486 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 CELF2O95319 508 aaKnown RBP3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 PAPSS2O95340 614 aaPredicted RBP3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 HSP90AB1P08238 724 aaKnown RBP3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 FGF3P11487 239 aaPredicted RBP3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 VPREB1P12018 145 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 SCG2P13521 617 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 PRLRP16471 622 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 IFNAR1P17181 557 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 ERCC2P18074 760 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 S1PR1P21453 382 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 UGT1A1P22309 533 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 GP5P40197 560 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 MMP14P50281 582 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 RBP5P82980 135 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 SPOCK1Q08629 439 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 MZT1Q08AG7 82 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 TFCP2Q12800 502 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 KRT81Q14533 505 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 MYLK3Q32MK0 819 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 KCNT1Q5JUK3 1230 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 C9orf57Q5W0N0 161 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 CST9LP1Q5W188 147 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 KRT79Q5XKE5 535 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 CAPRIN2Q6IMN6 1127 aaKnown RBP3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 TRNP1Q6NT89 227 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 RGMBQ6NW40 437 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 PAPD4Q6PIY7 484 aaKnown RBP3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 PET117Q6UWS5 81 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 CCDC186Q7Z3E2 898 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 ARMC9Q7Z3E5 817 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 METTL23Q86XA0 190 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 CEP57Q86XR8 500 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 EPHX4Q8IUS5 362 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 ZNF595Q8IYB9 648 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 CCAR2Q8N163 923 aaKnown RBP3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 AFAP1Q8N556 730 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 PI4KAP1Q8N8J0 262 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 CAMKVQ8NCB2 501 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 LILRB1Q8NHL6 650 aaPredicted RBP3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 SETD6Q8TBK2 473 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 WDR20Q8TBZ3 569 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 EXOC4Q96A65 974 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 ADGRG7Q96K78 797 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 OLFM1Q99784 485 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 CMKLR1Q99788 373 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 CITED2Q99967 270 aaPredicted RBP3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 NUP85Q9BW27 656 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 TMEM39BQ9GZU3 492 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 SPATC1LQ9H0A9 340 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 RAD21L1Q9H4I0 556 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 C6orf106Q9H6K1 298 aaPredicted RBP3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 XAB2Q9HCS7 855 aaKnown RBP3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 PFDN4Q9NQP4 134 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 ABCF3Q9NUQ8 709 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 OLAHQ9NV23 265 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 TMEM30AQ9NV96 361 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 LARSQ9P2J5 1176 aaKnown RBP3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 DNAJB9Q9UBS3 223 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 PADI3Q9ULW8 664 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 EXO1Q9UQ84 846 aaKnown RBP3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 LOXL2Q9Y4K0 774 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 SNX5Q9Y5X3 404 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 TRIP12Q14669 1992 aaPredicted RBP3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 NOTCH4Q99466 2003 aa3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 ZNF644Q9H582 1327 aaPredicted RBP3.17□□□□□ -1.9
SHCBP1-202ENST00000563219 TRIM64A6NGJ6 449 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 TRIM64BA6NI03 449 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 LILRA5A6NI73 299 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 SMTNL1A8MU46 457 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 ZNF587BE7ETH6 402 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 H0Y626 953 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 TMEM189-UBE2V1I3L0A0 370 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 HS3ST1O14792 307 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 ANKRD28O15084 1053 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 SLC16A5O15375 505 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 ZBTB43O43298 467 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 ZBTB11O95625 1053 aaPredicted RBP3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 HSPA4P34932 840 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 AMPHP49418 695 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 CLDN20P56880 219 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 BFSP1Q12934 665 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 UBE2V1Q13404 147 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 SNTA1Q13424 505 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 E2F5Q15329 346 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 SF3B4Q15427 424 aaKnown RBP eCLIP3.16□□□□□ -1.92e-7■■■□□ 18.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms