RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 CACNG1Q06432 222 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 GTF2H2Q13888 395 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 MOGQ16653 247 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 FAM171A1Q5VUB5 890 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 GTF2H2CQ6P1K8 395 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 LETMD1Q6P1Q0 360 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 CERS6Q6ZMG9 384 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 FRA10AC1Q70Z53 315 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 GOLGA7Q7Z5G4 137 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 THAP5Q7Z6K1 395 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 ZNF554Q86TJ5 538 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 FAM126BQ8IXS8 530 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 SVOPLQ8N434 492 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 DTWD1Q8N5C7 304 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 SMYD1Q8NB12 490 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 GLB1L3Q8NCI6 653 aaPredicted RBP12.9□□□□□ -0.34
USB1-207ENST00000563149 OR52B6Q8NGF0 335 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 GIPC2Q8TF65 315 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 OVCA2Q8WZ82 227 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 TMBIM1Q969X1 311 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 SDCCAG3Q96C92 435 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 SH3GL1Q99961 368 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 C19orf43Q9BQ61 176 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 FEM1AQ9BSK4 669 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 HPS4Q9NQG7 708 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 SMPD4Q9NXE4 827 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 USE1Q9NZ43 259 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.89□□□□□ -0.35
USB1-207ENST00000563149 SLC38A8A6NNN8 435 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 H0Y858 1186 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 H7C4K7 107 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 SLC28A1O00337 649 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 RAD51BO15315 384 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 OR1I1O60431 355 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 ABCB7O75027 752 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 SEC14L2O76054 403 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 WDR47O94967 919 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 GLUD1P00367 558 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 G6PDP11413 515 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 ZNF177Q13360 481 aaPredicted RBP12.89□□□□□ -0.35
USB1-207ENST00000563149 TOP3AQ13472 1001 aaPredicted RBP12.89□□□□□ -0.35
USB1-207ENST00000563149 C16orf72Q14CZ0 275 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 KIAA0040Q15053 153 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 NR6A1Q15406 480 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 AP5B1Q2VPB7 878 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 CCSAPQ6IQ19 270 aaPredicted RBP12.89□□□□□ -0.35
USB1-207ENST00000563149 METTL2BQ6P1Q9 378 aaKnown RBP12.89□□□□□ -0.35
USB1-207ENST00000563149 ELMSAN1Q6PJG2 1045 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 TMEM26Q6ZUK4 368 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 RASAL3Q86YV0 1011 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 PCSK9Q8NBP7 692 aaKnown RBP12.89□□□□□ -0.35
USB1-207ENST00000563149 PDZD8Q8NEN9 1154 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 OR4F6Q8NGB9 312 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 DNAJB8Q8NHS0 232 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 TBC1D15Q8TC07 691 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 HDAC2Q92769 488 aaKnown RBP12.89□□□□□ -0.35
USB1-207ENST00000563149 PLD4Q96BZ4 506 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 HSPBAP1Q96EW2 488 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 ZNF583Q96ND8 569 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 MUS81Q96NY9 551 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 SEPT5Q99719 369 aaPredicted RBP12.89□□□□□ -0.35
USB1-207ENST00000563149 DCUN1D5Q9BTE7 237 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 ING2Q9H160 280 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 ACTL8Q9H568 366 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 PALMDQ9NP74 551 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 TLR9Q9NR96 1032 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 IRAK4Q9NWZ3 460 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 DNAJB9Q9UBS3 223 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 USP22Q9UPT9 525 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 EIF3LQ9Y262 564 aaKnown RBP12.89□□□□□ -0.35
USB1-207ENST00000563149 SLC27A5Q9Y2P5 690 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 HEMK1Q9Y5R4 338 aaPredicted RBP12.89□□□□□ -0.35
USB1-207ENST00000563149 ACTL7AQ9Y615 435 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 hCG_2014768A0A024R1R8 64 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 OR7A17O14581 309 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 PRMT5O14744 637 aaPredicted RBP12.89□□□□□ -0.35
USB1-207ENST00000563149 RGS14O43566 566 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 TBC1D4O60343 1298 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 CBFA2T3O75081 653 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 DNAJB5O75953 348 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 SCELO95171 688 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 PCSK2P16519 638 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 CCNA2P20248 432 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 RPS3P23396 243 aaKnown RBP eCLIP12.89□□□□□ -0.352e-6■■□□□ 14.1
USB1-207ENST00000563149 AKT1P31749 480 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 HTR6P50406 440 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 ARPP19P56211 112 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 GABARAPL2P60520 117 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 PLCL1Q15111 1095 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 SKIV2LQ15477 1246 aaKnown RBP12.89□□□□□ -0.35
USB1-207ENST00000563149 NCEH1Q6PIU2 408 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 ZNF783Q6ZMS7 281 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 NECAB2Q7Z6G3 386 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 MILR1Q7Z6M3 343 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 RALGPS2Q86X27 583 aaPredicted RBP12.89□□□□□ -0.35
USB1-207ENST00000563149 IFNL1Q8IU54 200 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 ZDHHC13Q8IUH4 622 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 C8orf59Q8N0T1 100 aaPredicted RBP12.89□□□□□ -0.35
USB1-207ENST00000563149 CLEC4FQ8N1N0 589 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 TRIB2Q92519 343 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms