RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 HIBCHQ6NVY1 386 aaPredicted RBP6.08□□□□□ -1.44
CNOT1-204ENST00000563130 IYDQ6PHW0 289 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 AFTPHQ6ULP2 937 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 ABRAXAS1Q6UWZ7 409 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 PACS1Q6VY07 963 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 CERS6Q6ZMG9 384 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 EFL1Q7Z2Z2 1120 aaKnown RBP6.08□□□□□ -1.44
CNOT1-204ENST00000563130 TMPRSS12Q86WS5 348 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 TRAPPC5Q8IUR0 188 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 OR4L1Q8NH43 312 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 IFI44Q8TCB0 444 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 TRIM51Q9BSJ1 452 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 SCNM1Q9BWG6 230 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 SIRPGQ9P1W8 387 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 ZFC3H1O60293 1989 aaKnown RBP6.08□□□□□ -1.44
CNOT1-204ENST00000563130 KIR2DS5A0A0G2JLQ3 304 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 A0A0G2JNG1 304 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 ZCWPW2A0A1B0GU75 182 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 C17orf113A0A1B0GUU1 675 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 A0A1W2PQM1 296 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 CPED1A4D0V7 1026 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 MGAT4DA6NG13 374 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 OR5K4A6NMS3 321 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 KIR2DS3K7RE56 304 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 NTN3O00634 580 aaPredicted RBP6.08□□□□□ -1.44
CNOT1-204ENST00000563130 CASC3O15234 703 aaKnown RBP6.08□□□□□ -1.44
CNOT1-204ENST00000563130 PPM1DO15297 605 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 RAD51CO43502 376 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 OPA1O60313 960 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 RALBP11234 206 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 NSG1P42857 185 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 MAZP56270 477 aaKnown RBP6.08□□□□□ -1.44
CNOT1-204ENST00000563130 PRAMEP78395 509 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 SEMA3AQ14563 771 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 KIR2DS5Q14953 304 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 INSCQ1MX18 579 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.08□□□□□ -1.44
CNOT1-204ENST00000563130 AGAP9Q5VTM2 703 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 IZUMO3Q5VZ72 239 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 METRNLQ641Q3 311 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 TAS2R42Q7RTR8 314 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 AMZ2Q86W34 360 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 GALNT15Q8N3T1 639 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 CLDN19Q8N6F1 224 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 BEND7Q8N7W2 519 aaPredicted RBP6.08□□□□□ -1.44
CNOT1-204ENST00000563130 DCBLD1Q8N8Z6 715 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 OR6P1Q8NGX9 317 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 OR2L2Q8NH16 312 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 SLC37A2Q8TED4 501 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 NAT14Q8WUY8 206 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 CCDC74AQ96AQ1 378 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 ZNF775Q96BV0 537 aaPredicted RBP6.08□□□□□ -1.44
CNOT1-204ENST00000563130 FCRL3Q96P31 734 aaPredicted RBP6.08□□□□□ -1.44
CNOT1-204ENST00000563130 CCDC3Q9BQI4 270 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 TRIM56Q9BRZ2 755 aaKnown RBP6.08□□□□□ -1.44
CNOT1-204ENST00000563130 ERP44Q9BS26 406 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 PRDM8Q9NQV8 689 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 SCHIP1Q9P0W5 487 aaPredicted RBP6.08□□□□□ -1.44
CNOT1-204ENST00000563130 MARCH4Q9P2E8 410 aaPredicted RBP6.08□□□□□ -1.44
CNOT1-204ENST00000563130 LRIT1Q9P2V4 623 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 KLK13Q9UKR3 277 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 NEUROG3Q9Y4Z2 214 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 PCDHGA11Q9Y5H2 935 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 RNF215Q9Y6U7 377 aa6.08□□□□□ -1.44
CNOT1-204ENST00000563130 COL27A1Q8IZC6 1860 aaPredicted RBP6.07□□□□□ -1.44
CNOT1-204ENST00000563130 ASPMQ8IZT6 3477 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 RP1P56715 2156 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 KNTC1P50748 2209 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 EFCAB8A8MWE9 144 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 CD3EAPO15446 510 aaKnown RBP6.07□□□□□ -1.44
CNOT1-204ENST00000563130 B4GAT1O43505 415 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 OR1I1O60431 355 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 URI1O94763 535 aaPredicted RBP6.07□□□□□ -1.44
CNOT1-204ENST00000563130 USP1O94782 785 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 AP2A2O94973 939 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 IL2RAP01589 272 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 XRCC1P18887 633 aaPredicted RBP6.07□□□□□ -1.44
CNOT1-204ENST00000563130 IDSP22304 550 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 RPL21P46778 160 aaKnown RBP6.07□□□□□ -1.44
CNOT1-204ENST00000563130 ATP1A2P50993 1020 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 ITGA8P53708 1063 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 CLDN6P56747 220 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 UBE2IP63279 158 aaKnown RBP6.07□□□□□ -1.44
CNOT1-204ENST00000563130 C2orf54Q08AI8 447 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 NFE2L1Q14494 772 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 WHAMMP3Q1A5X7 153 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 TYSND1Q2T9J0 566 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 PLA2G4EQ3MJ16 856 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 ANKRD20A4Q4UJ75 823 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 FASTKD1Q53R41 847 aaKnown RBP6.07□□□□□ -1.44
CNOT1-204ENST00000563130 HES3Q5TGS1 186 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 LYPLAL1Q5VWZ2 237 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 DUPD1Q68J44 220 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 CES3Q6UWW8 571 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 CCNI2Q6ZMN8 369 aaPredicted RBP6.07□□□□□ -1.44
CNOT1-204ENST00000563130 FAM83HQ6ZRV2 1179 aaPredicted RBP6.07□□□□□ -1.44
CNOT1-204ENST00000563130 DET1Q7L5Y6 550 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 MAATS1Q7Z4T9 603 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 SPRED1Q7Z699 444 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 GPR150Q8NGU9 434 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms