RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 SNX2O60749 519 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 VPS26AO75436 327 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 PIAS1O75925 651 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 SLC2A4P14672 509 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 CHRM3P20309 590 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 PLA2G5P39877 138 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 GP5P40197 560 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 LIMK1P53667 647 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 BOP1Q14137 746 aaKnown RBP18.48■□□□□ 0.55
RAB40C-207ENST00000563109 NFE2L1Q14494 772 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 EFTUD2Q15029 972 aaKnown RBP eCLIP18.48■□□□□ 0.557e-7■■■■■ 38.1
RAB40C-207ENST00000563109 UBAP2Q5T6F2 1119 aaKnown RBP18.48■□□□□ 0.55
RAB40C-207ENST00000563109 CFAP206Q8IYR0 622 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 KRT222Q8N1A0 295 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 EID2Q8N6I1 236 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 GPATCH11Q8N954 259 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 OR4C6Q8NH72 309 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 UHMK1Q8TAS1 419 aaKnown RBP18.48■□□□□ 0.55
RAB40C-207ENST00000563109 NETO1Q8TDF5 533 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 SETD7Q8WTS6 366 aaKnown RBP18.48■□□□□ 0.55
RAB40C-207ENST00000563109 GLMNQ92990 594 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 CAVIN3Q969G5 261 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 ATXN7L3BQ96GX2 97 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 AARSD1Q9BTE6 412 aaKnown RBP18.48■□□□□ 0.55
RAB40C-207ENST00000563109 DPEP2Q9H4A9 486 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 RHOJQ9H4E5 214 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 COG4Q9H9E3 785 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 PSAT1Q9Y617 370 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 IKBKGQ9Y6K9 419 aa18.48■□□□□ 0.55
RAB40C-207ENST00000563109 IQCF5A8MTL0 148 aa18.47■□□□□ 0.55
RAB40C-207ENST00000563109 NIPSNAP2O75323 286 aa18.47■□□□□ 0.55
RAB40C-207ENST00000563109 ERLIN1O75477 346 aa18.47■□□□□ 0.55
RAB40C-207ENST00000563109 APOA4P06727 396 aa18.47■□□□□ 0.55
RAB40C-207ENST00000563109 GABRB3P28472 473 aa18.47■□□□□ 0.55
RAB40C-207ENST00000563109 HALP42357 657 aa18.47■□□□□ 0.55
RAB40C-207ENST00000563109 ABCG1P45844 678 aa18.47■□□□□ 0.55
RAB40C-207ENST00000563109 PLOD1Q02809 727 aaPredicted RBP18.47■□□□□ 0.55
RAB40C-207ENST00000563109 SEPT7Q16181 437 aaKnown RBP18.47■□□□□ 0.55
RAB40C-207ENST00000563109 C6orf132Q5T0Z8 1188 aa18.47■□□□□ 0.55
RAB40C-207ENST00000563109 GRTP1Q5TC63 336 aa18.47■□□□□ 0.55
RAB40C-207ENST00000563109 FAM45BPQ6NSW5 357 aa18.47■□□□□ 0.55
RAB40C-207ENST00000563109 ZCCHC8Q6NZY4 707 aaKnown RBP18.47■□□□□ 0.55
RAB40C-207ENST00000563109 OTOAQ7RTW8 1153 aa18.47■□□□□ 0.55
RAB40C-207ENST00000563109 ZC3HC1Q86WB0 502 aaKnown RBP18.47■□□□□ 0.55
RAB40C-207ENST00000563109 NAXDQ8IW45 347 aa18.47■□□□□ 0.55
RAB40C-207ENST00000563109 FAM45AQ8TCE6 357 aa18.47■□□□□ 0.55
RAB40C-207ENST00000563109 LKAAEAR1Q8TD35 194 aa18.47■□□□□ 0.55
RAB40C-207ENST00000563109 ZDHHC1Q8WTX9 485 aa18.47■□□□□ 0.55
RAB40C-207ENST00000563109 KCNJ9Q92806 393 aa18.47■□□□□ 0.55
RAB40C-207ENST00000563109 TMEM159Q96B96 161 aa18.47■□□□□ 0.55
RAB40C-207ENST00000563109 ELMO2Q96JJ3 720 aa18.47■□□□□ 0.55
RAB40C-207ENST00000563109 NDNQ99608 321 aa18.47■□□□□ 0.55
RAB40C-207ENST00000563109 SARS2Q9NP81 518 aaKnown RBP18.47■□□□□ 0.55
RAB40C-207ENST00000563109 SPATS2LQ9NUQ6 558 aaKnown RBP18.47■□□□□ 0.55
RAB40C-207ENST00000563109 EVA1BQ9NVM1 165 aa18.47■□□□□ 0.55
RAB40C-207ENST00000563109 SIRPGQ9P1W8 387 aa18.47■□□□□ 0.55
RAB40C-207ENST00000563109 ACSL5Q9ULC5 683 aa18.47■□□□□ 0.55
RAB40C-207ENST00000563109 ST14Q9Y5Y6 855 aa18.47■□□□□ 0.55
RAB40C-207ENST00000563109 EXOC1LA0A1B0GW35 172 aa18.46■□□□□ 0.55
RAB40C-207ENST00000563109 C1QAP02745 245 aa18.46■□□□□ 0.55
RAB40C-207ENST00000563109 SLC35G4P0C7Q5 338 aa18.46■□□□□ 0.55
RAB40C-207ENST00000563109 CD59P13987 128 aa18.46■□□□□ 0.55
RAB40C-207ENST00000563109 SPRP35270 261 aaPredicted RBP18.46■□□□□ 0.55
RAB40C-207ENST00000563109 RPA4Q13156 261 aa18.46■□□□□ 0.55
RAB40C-207ENST00000563109 UAP1Q16222 522 aaPredicted RBP18.46■□□□□ 0.55
RAB40C-207ENST00000563109 TTLL9Q3SXZ7 439 aa18.46■□□□□ 0.55
RAB40C-207ENST00000563109 METRNLQ641Q3 311 aa18.46■□□□□ 0.55
RAB40C-207ENST00000563109 UGT3A1Q6NUS8 523 aa18.46■□□□□ 0.55
RAB40C-207ENST00000563109 ZNF549Q6P9A3 640 aa18.46■□□□□ 0.55
RAB40C-207ENST00000563109 FAM83HQ6ZRV2 1179 aaPredicted RBP18.46■□□□□ 0.55
RAB40C-207ENST00000563109 TAOK1Q7L7X3 1001 aa18.46■□□□□ 0.55
RAB40C-207ENST00000563109 ASZ1Q8WWH4 475 aa18.46■□□□□ 0.55
RAB40C-207ENST00000563109 MRRFQ96E11 262 aaKnown RBP18.46■□□□□ 0.55
RAB40C-207ENST00000563109 VPS39Q96JC1 886 aa18.46■□□□□ 0.55
RAB40C-207ENST00000563109 RBBP8Q99708 897 aa18.46■□□□□ 0.55
RAB40C-207ENST00000563109 CCDC77Q9BR77 488 aa18.46■□□□□ 0.55
RAB40C-207ENST00000563109 TAS2R13Q9NYV9 303 aa18.46■□□□□ 0.55
RAB40C-207ENST00000563109 NCKIPSDQ9NZQ3 722 aa18.46■□□□□ 0.55
RAB40C-207ENST00000563109 TBC1D29Q9UFV1 150 aa18.46■□□□□ 0.55
RAB40C-207ENST00000563109 KNL1Q8NG31 2342 aa18.46■□□□□ 0.55
RAB40C-207ENST00000563109 COL5A1P20908 1838 aaPredicted RBP18.45■□□□□ 0.54
RAB40C-207ENST00000563109 FAM95CA0A1B0GW59 222 aa18.45■□□□□ 0.54
RAB40C-207ENST00000563109 INHBAP08476 426 aa18.45■□□□□ 0.54
RAB40C-207ENST00000563109 F3P13726 295 aa18.45■□□□□ 0.54
RAB40C-207ENST00000563109 AOAHP28039 575 aa18.45■□□□□ 0.54
RAB40C-207ENST00000563109 CCR7P32248 378 aa18.45■□□□□ 0.54
RAB40C-207ENST00000563109 RPIAP49247 311 aa18.45■□□□□ 0.54
RAB40C-207ENST00000563109 SLC29A2Q14542 456 aa18.45■□□□□ 0.54
RAB40C-207ENST00000563109 BRD3Q15059 726 aa18.45■□□□□ 0.54
RAB40C-207ENST00000563109 RBM20Q5T481 1227 aaKnown RBP18.45■□□□□ 0.54
RAB40C-207ENST00000563109 HECTD2Q5U5R9 776 aa18.45■□□□□ 0.54
RAB40C-207ENST00000563109 AGAP9Q5VTM2 703 aa18.45■□□□□ 0.54
RAB40C-207ENST00000563109 ARL10Q8N8L6 244 aa18.45■□□□□ 0.54
RAB40C-207ENST00000563109 MYRIPQ8NFW9 859 aa18.45■□□□□ 0.54
RAB40C-207ENST00000563109 RHBDD1Q8TEB9 315 aa18.45■□□□□ 0.54
RAB40C-207ENST00000563109 FAM136AQ96C01 138 aa18.45■□□□□ 0.54
RAB40C-207ENST00000563109 PAFAH2Q99487 392 aa18.45■□□□□ 0.54
RAB40C-207ENST00000563109 STN1Q9H668 368 aaKnown RBP18.45■□□□□ 0.54
RAB40C-207ENST00000563109 PRDM8Q9NQV8 689 aa18.45■□□□□ 0.54
RAB40C-207ENST00000563109 TRMT6Q9UJA5 497 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms