RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 SQSTM1Q13501 440 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 NFE2L1Q14494 772 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 CTSL3PQ5NE16 218 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 PERM1Q5SV97 790 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 CAPRIN2Q6IMN6 1127 aaKnown RBP13.17□□□□□ -0.3
CDH1-204ENST00000562118 KIAA0408Q6ZU52 694 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 DET1Q7L5Y6 550 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 AVL9Q8NBF6 648 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 C2CD4AQ8NCU7 369 aaPredicted RBP13.17□□□□□ -0.3
CDH1-204ENST00000562118 LRRN4CLQ8ND94 238 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 IFI44Q8TCB0 444 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 CALML6Q8TD86 181 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 NAT14Q8WUY8 206 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 PATE1Q8WXA2 126 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 CERS2Q96G23 380 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 CCM2Q9BSQ5 444 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 FAM167BQ9BTA0 163 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 TWSG1Q9GZX9 223 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 OR52A5Q9H2C5 316 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 DPEP2Q9H4A9 486 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 COG4Q9H9E3 785 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 VPS37BQ9H9H4 285 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 FAM114A2Q9NRY5 505 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 IL1RAPL1Q9NZN1 696 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 ZC3H7BQ9UGR2 993 aaKnown RBP13.17□□□□□ -0.3
CDH1-204ENST00000562118 RABGEF1Q9UJ41 708 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 ACSL5Q9ULC5 683 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 DOLKQ9UPQ8 538 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 CDYLQ9Y232 598 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 APOBEC2Q9Y235 224 aaKnown RBP13.17□□□□□ -0.3
CDH1-204ENST00000562118 VPS9D1Q9Y2B5 631 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 WDR37Q9Y2I8 494 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 MED16Q9Y2X0 877 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 MAD1L1Q9Y6D9 718 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 CEP295Q9C0D2 2601 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 B4DGG1 531 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 GOLGA8KD6RF30 607 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 GOLGA8TH3BQL2 631 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 LIN7AO14910 233 aaPredicted RBP13.16□□□□□ -0.3
CDH1-204ENST00000562118 GPC4O75487 556 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 FTH1P02794 183 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 ESR1P03372 595 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 ADRB1P08588 477 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 GSTA2P09210 222 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 OR56A5P0C7T3 313 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 MYF5P13349 255 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 CD9P21926 228 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 IDSP22304 550 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 SLC1A2P43004 574 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 GPR3P46089 330 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 LEPRP48357 1165 aaKnown RBP13.16□□□□□ -0.3
CDH1-204ENST00000562118 PLTPP55058 493 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 MAZP56270 477 aaKnown RBP13.16□□□□□ -0.3
CDH1-204ENST00000562118 PDIA2Q13087 525 aaKnown RBP13.16□□□□□ -0.3
CDH1-204ENST00000562118 CLCA4Q14CN2 919 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 TCEA2Q15560 299 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 PLA2G4EQ3MJ16 856 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 ZNF789Q5FWF6 425 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 N4BP2L1Q5TBK1 243 aaPredicted RBP13.16□□□□□ -0.3
CDH1-204ENST00000562118 ZNF470Q6ECI4 717 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 LDB1Q86U70 411 aaPredicted RBP13.16□□□□□ -0.3
CDH1-204ENST00000562118 KCNMB4Q86W47 210 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 UNC5BQ8IZJ1 945 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 LILRA3Q8N6C8 439 aaPredicted RBP13.16□□□□□ -0.3
CDH1-204ENST00000562118 FBXO36Q8NEA4 188 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 PRDM8Q9NQV8 689 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 POT1Q9NUX5 634 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 ZNF624Q9P2J8 865 aaPredicted RBP13.16□□□□□ -0.3
CDH1-204ENST00000562118 KLHL42Q9P2K6 505 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 CHMP2BQ9UQN3 213 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 PCDHB1Q9Y5F3 818 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 RNF215Q9Y6U7 377 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 FREM2Q5SZK8 3169 aa13.16□□□□□ -0.3
CDH1-204ENST00000562118 LILRA5A6NI73 299 aa13.15□□□□□ -0.3
CDH1-204ENST00000562118 PPM1DO15297 605 aa13.15□□□□□ -0.3
CDH1-204ENST00000562118 AOAHP28039 575 aa13.15□□□□□ -0.3
CDH1-204ENST00000562118 GABRB3P28472 473 aa13.15□□□□□ -0.3
CDH1-204ENST00000562118 CD151P48509 253 aa13.15□□□□□ -0.3
CDH1-204ENST00000562118 SHC2P98077 582 aa13.15□□□□□ -0.3
CDH1-204ENST00000562118 DAB2P98082 770 aa13.15□□□□□ -0.3
CDH1-204ENST00000562118 E2F1Q01094 437 aa13.15□□□□□ -0.3
CDH1-204ENST00000562118 INSM1Q01101 510 aaPredicted RBP13.15□□□□□ -0.3
CDH1-204ENST00000562118 PLOD1Q02809 727 aaPredicted RBP13.15□□□□□ -0.3
CDH1-204ENST00000562118 CLPPQ16740 277 aaPredicted RBP13.15□□□□□ -0.3
CDH1-204ENST00000562118 TEDDM1Q5T9Z0 273 aa13.15□□□□□ -0.3
CDH1-204ENST00000562118 TRMT10BQ6PF06 316 aaKnown RBP13.15□□□□□ -0.3
CDH1-204ENST00000562118 EFL1Q7Z2Z2 1120 aaKnown RBP13.15□□□□□ -0.3
CDH1-204ENST00000562118 SPRED1Q7Z699 444 aa13.15□□□□□ -0.3
CDH1-204ENST00000562118 SDCCAG8Q86SQ7 713 aaPredicted RBP13.15□□□□□ -0.3
CDH1-204ENST00000562118 DENND6AQ8IWF6 608 aa13.15□□□□□ -0.3
CDH1-204ENST00000562118 RBM12BQ8IXT5 1001 aaKnown RBP13.15□□□□□ -0.3
CDH1-204ENST00000562118 ZBED8Q8IZ13 594 aa13.15□□□□□ -0.3
CDH1-204ENST00000562118 EIF1ADQ8N9N8 165 aaKnown RBP13.15□□□□□ -0.3
CDH1-204ENST00000562118 WDR48Q8TAF3 677 aa13.15□□□□□ -0.3
CDH1-204ENST00000562118 GSDMBQ8TAX9 411 aa13.15□□□□□ -0.3
CDH1-204ENST00000562118 MAPK15Q8TD08 544 aa13.15□□□□□ -0.3
CDH1-204ENST00000562118 LKAAEAR1Q8TD35 194 aa13.15□□□□□ -0.3
CDH1-204ENST00000562118 CCDC74AQ96AQ1 378 aa13.15□□□□□ -0.3
CDH1-204ENST00000562118 FUT8Q9BYC5 575 aa13.15□□□□□ -0.3
CDH1-204ENST00000562118 C20orf96Q9NUD7 363 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms