RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 PDGFBP01127 241 aaPredicted RBP11.46□□□□□ -0.58
PCAT1-202ENST00000561978 EEF1DP29692 281 aaKnown RBP11.46□□□□□ -0.58
PCAT1-202ENST00000561978 CDKN1CP49918 316 aaPredicted RBP11.46□□□□□ -0.58
PCAT1-202ENST00000561978 PTPN5P54829 565 aa11.46□□□□□ -0.58
PCAT1-202ENST00000561978 KLC1Q07866 573 aa11.46□□□□□ -0.58
PCAT1-202ENST00000561978 SIGLEC14Q08ET2 396 aa11.46□□□□□ -0.58
PCAT1-202ENST00000561978 TSNQ15631 228 aaKnown RBP11.46□□□□□ -0.58
PCAT1-202ENST00000561978 ZNF423Q2M1K9 1284 aa11.46□□□□□ -0.58
PCAT1-202ENST00000561978 EML3Q32P44 896 aa11.46□□□□□ -0.58
PCAT1-202ENST00000561978 AGKQ53H12 422 aa11.46□□□□□ -0.58
PCAT1-202ENST00000561978 CTSL3PQ5NE16 218 aa11.46□□□□□ -0.58
PCAT1-202ENST00000561978 ATXN7L2Q5T6C5 722 aaPredicted RBP11.46□□□□□ -0.58
PCAT1-202ENST00000561978 KANK2Q63ZY3 851 aa11.46□□□□□ -0.58
PCAT1-202ENST00000561978 CLEC6AQ6EIG7 209 aa11.46□□□□□ -0.58
PCAT1-202ENST00000561978 IRGCQ6NXR0 463 aa11.46□□□□□ -0.58
PCAT1-202ENST00000561978 GPSM1Q86YR5 675 aa11.46□□□□□ -0.58
PCAT1-202ENST00000561978 ADGRG2Q8IZP9 1017 aa11.46□□□□□ -0.58
PCAT1-202ENST00000561978 PYDC1Q8WXC3 89 aa11.46□□□□□ -0.58
PCAT1-202ENST00000561978 DLG3Q92796 817 aa11.46□□□□□ -0.58
PCAT1-202ENST00000561978 FAM136AQ96C01 138 aa11.46□□□□□ -0.58
PCAT1-202ENST00000561978 SH3GL3Q99963 347 aa11.46□□□□□ -0.58
PCAT1-202ENST00000561978 NUSAP1Q9BXS6 441 aaKnown RBP11.46□□□□□ -0.58
PCAT1-202ENST00000561978 RSPH9Q9H1X1 276 aaPredicted RBP11.46□□□□□ -0.58
PCAT1-202ENST00000561978 P2RY12Q9H244 342 aa11.46□□□□□ -0.58
PCAT1-202ENST00000561978 ZFYVE1Q9HBF4 777 aa11.46□□□□□ -0.58
PCAT1-202ENST00000561978 DHRS7Q9Y394 339 aa11.46□□□□□ -0.58
PCAT1-202ENST00000561978 DNAJC15Q9Y5T4 150 aa11.46□□□□□ -0.58
PCAT1-202ENST00000561978 A0A0J9YYE9 177 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 FAM86C2PA6NEL3 165 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 BBIP1A8MTZ0 92 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 SIX3O95343 332 aaPredicted RBP11.45□□□□□ -0.58
PCAT1-202ENST00000561978 MT-CO1P00395 513 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 TRBC1P01850 177 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 TCF3P15923 654 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 TSPAN8P19075 237 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 RPS3P23396 243 aaKnown RBP eCLIP11.45□□□□□ -0.58
PCAT1-202ENST00000561978 PSMD8P48556 350 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 MRPS35P82673 323 aaKnown RBP11.45□□□□□ -0.58
PCAT1-202ENST00000561978 RUNX3Q13761 415 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 BLMHQ13867 455 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 SLC44A4Q53GD3 710 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 HACD2Q6Y1H2 254 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 TPGS1Q6ZTW0 290 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 LYSMD3Q7Z3D4 306 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 SNX20Q7Z614 316 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 CAMK1DQ8IU85 385 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 APCDD1Q8J025 514 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 SIDT2Q8NBJ9 832 aaKnown RBP11.45□□□□□ -0.58
PCAT1-202ENST00000561978 PCYOX1LQ8NBM8 494 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 CD200R1Q8TD46 325 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 CSGALNACT1Q8TDX6 532 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 TRPC4APQ8TEL6 797 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 TWIST2Q8WVJ9 160 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 BHMTQ93088 406 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 LINGO1Q96FE5 620 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 CLPBQ9H078 707 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 AKTIPQ9H8T0 292 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 CCDC167Q9P0B6 97 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 C6orf203Q9P0P8 240 aaPredicted RBP11.45□□□□□ -0.58
PCAT1-202ENST00000561978 SARDHQ9UL12 918 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 PCDHGA10Q9Y5H3 936 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 PIAS3Q9Y6X2 628 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 CDC7O00311 574 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 TRIM38O00635 465 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 OR1I1O60431 355 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 NIPSNAP2O75323 286 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 TPPPO94811 219 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 RPS17P08708 135 aaKnown RBP11.45□□□□□ -0.58
PCAT1-202ENST00000561978 LBPP18428 481 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 ITGALP20701 1170 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 SERPINA4P29622 427 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 PSME3P61289 254 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 SNRPD1P62314 119 aaKnown RBP11.45□□□□□ -0.58
PCAT1-202ENST00000561978 FLOT2Q14254 428 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 GSTA3Q16772 222 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 GPR33Q49SQ1 333 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 NAIF1Q69YI7 327 aaPredicted RBP11.45□□□□□ -0.58
PCAT1-202ENST00000561978 GK5Q6ZS86 529 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 SPATA19Q7Z5L4 167 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 TMEM126BQ8IUX1 230 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 RBFAQ8N0V3 343 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 CBARPQ8N350 705 aaPredicted RBP11.45□□□□□ -0.58
PCAT1-202ENST00000561978 CHCHD4Q8N4Q1 142 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 ZNF557Q8N988 423 aaPredicted RBP11.45□□□□□ -0.58
PCAT1-202ENST00000561978 OR56A4Q8NGH8 313 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 WFDC5Q8TCV5 224 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 ZNF483Q8TF39 744 aaPredicted RBP11.45□□□□□ -0.58
PCAT1-202ENST00000561978 EEF1AKMT1Q8WVE0 214 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 ISG20Q96AZ6 181 aaKnown RBP11.45□□□□□ -0.58
PCAT1-202ENST00000561978 ROPN1LQ96C74 230 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 SMIM14Q96QK8 99 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 NPAS2Q99743 824 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 TM6SF2Q9BZW4 377 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 WNT16Q9UBV4 365 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 EVLQ9UI08 416 aaPredicted RBP11.45□□□□□ -0.58
PCAT1-202ENST00000561978 GNPTGQ9UJJ9 305 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 PSMD13Q9UNM6 376 aa11.45□□□□□ -0.58
PCAT1-202ENST00000561978 MTF2Q9Y483 593 aaPredicted RBP11.45□□□□□ -0.58
PCAT1-202ENST00000561978 TNPO3Q9Y5L0 923 aaKnown RBP11.45□□□□□ -0.58
PCAT1-202ENST00000561978 COL4A2P08572 1712 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms