RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 SPATS2LQ9NUQ6 558 aaKnown RBP13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 MAD1L1Q9Y6D9 718 aa13.75□□□□□ -0.21
PKNOX1-209ENST00000560448 CCDC78A2IDD5 438 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 A6NCN8 305 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 OR2AG2A6NM03 316 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 B4DGG1 531 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 H3BMM5 538 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 CCL22O00626 93 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 VAPBO95292 243 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 PMLP29590 882 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 ARCN1P48444 511 aaKnown RBP13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 CTSCP53634 463 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 B4GALNT1Q00973 533 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 ILF2Q12905 390 aaKnown RBP13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 BIRC2Q13490 618 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 FRG1Q14331 258 aaKnown RBP13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 LONRF1Q17RB8 773 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 TYSND1Q2T9J0 566 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 SPANXN3Q5MJ09 141 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 ZNF648Q5T619 568 aaPredicted RBP13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 N4BP2L1Q5TBK1 243 aaPredicted RBP13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 METRNLQ641Q3 311 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 IYDQ6PHW0 289 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 CEP128Q6ZU80 1094 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 ZNF438Q7Z4V0 828 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 RAB44Q7Z6P3 723 aaPredicted RBP13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 KYQ8NBH2 561 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 ZBTB9Q96C00 473 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 SGF29Q96ES7 293 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 PANX3Q96QZ0 392 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 CCM2Q9BSQ5 444 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 FAM167BQ9BTA0 163 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 ABCG4Q9H172 646 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 EPB41L4BQ9H329 900 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 EPB41L1Q9H4G0 881 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 UCK1Q9HA47 277 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 POT1Q9NUX5 634 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 INTS10Q9NVR2 710 aaKnown RBP13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 GULP1Q9UBP9 304 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 KCNK6Q9Y257 313 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 PRKAB1Q9Y478 270 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 PCDHB1Q9Y5F3 818 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 ST14Q9Y5Y6 855 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 FAM169AQ9Y6X4 670 aa13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 ARHGEF17Q96PE2 2063 aaPredicted RBP13.74□□□□□ -0.21
PKNOX1-209ENST00000560448 ZCWPW2A0A1B0GU75 182 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 E7ESA3 106 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 PRMT5O14744 637 aaPredicted RBP13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 LIN7AO14910 233 aaPredicted RBP13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 XRCC1P18887 633 aaPredicted RBP13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 RPS3P23396 243 aaKnown RBP eCLIP13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 ARNTP27540 789 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 SHC2P98077 582 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 DNAJC3Q13217 504 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 SMAD1Q15797 465 aaKnown RBP13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 HSP90B2PQ58FF3 399 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 GUSBP11Q6P575 273 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 CENPUQ71F23 418 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 EFL1Q7Z2Z2 1120 aaKnown RBP13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 SLCO6A1Q86UG4 719 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 ARL14Q8N4G2 192 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 ZFPM2Q8WW38 1151 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 ZNF669Q96BR6 464 aaPredicted RBP13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 DPYSL5Q9BPU6 564 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 TSPYL1Q9H0U9 437 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 OSGEPL1Q9H4B0 414 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 FAM96AQ9H5X1 160 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 SIRPGQ9P1W8 387 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 TBC1D29Q9UFV1 150 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 MTRF1LQ9UGC7 380 aaKnown RBP13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 GNPTGQ9UJJ9 305 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 PLAAQ9Y263 795 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 PCYT1BQ9Y5K3 369 aaPredicted RBP13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 GOLGA4Q13439 2230 aaKnown RBP13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 SPTBN4Q9H254 2564 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 CPED1A4D0V7 1026 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 FAM221BA6H8Z2 402 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 OR51F1A6NGY5 319 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 RHPN2P1A8MT19 583 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 PDZK1P1A8MUH7 402 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 KPNA5O15131 536 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 POLR3GO15318 223 aaPredicted RBP13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 SGTAO43765 313 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 OPA1O60313 960 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 NDUFS3O75489 264 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 NDUFS1P28331 727 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 CA5AP35218 305 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 CD151P48509 253 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 CDKN1CP49918 316 aaPredicted RBP13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 EPHA4P54764 986 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 GPLD1P80108 840 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 HHEXQ03014 270 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 THOC5Q13769 683 aaKnown RBP13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 NEPROQ6NW34 567 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 TMPRSS7Q7RTY8 843 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 GALNT7Q86SF2 657 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 CILP2Q8IUL8 1156 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 LRIT1Q9P2V4 623 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 SLC23A2Q9UGH3 650 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms