RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 CCDC38Q502W7 563 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 PHF19Q5T6S3 580 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 ARMC3Q5W041 872 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 TTC27Q6P3X3 843 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 PACS1Q6VY07 963 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 LRRC69Q6ZNQ3 347 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 MICALCLQ6ZW33 695 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 ZNF534Q76KX8 674 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 DTX1Q86Y01 620 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 AGBL5Q8NDL9 886 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 RCBTB1Q8NDN9 531 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 HM13Q8TCT9 377 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 DCUN1D1Q96GG9 259 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 AHCYL2Q96HN2 611 aaKnown RBP12.94□□□□□ -0.34
SMAD3-213ENST00000560175 MS4A14Q96JA4 679 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 OSBPL9Q96SU4 736 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 INSM2Q96T92 566 aaPredicted RBP12.94□□□□□ -0.34
SMAD3-213ENST00000560175 SPRY4Q9C004 299 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 TCAF1Q9Y4C2 921 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 IGSF10Q6WRI0 2623 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 SDK2Q58EX2 2172 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 B4E171 279 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 C9orf172C9J069 976 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 CFAP99D6REC4 459 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 UBXN7O94888 489 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 AP2A2O94973 939 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 GAS8O95995 478 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 JMJD7P0C870 316 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 CCL4P13236 92 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 TSPAN7P41732 249 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 HALP42357 657 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 NSG1P42857 185 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 ABCG1P45844 678 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 SEPT6Q14141 434 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 GPR18Q14330 331 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 SEPT7Q16181 437 aaKnown RBP12.93□□□□□ -0.34
SMAD3-213ENST00000560175 DBN1Q16643 649 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 ZRANB3Q5FWF4 1079 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 PCID2Q5JVF3 399 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 LRRC8BQ6P9F7 803 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 C19orf48Q6RUI8 117 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 PPP1R21Q6ZMI0 780 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 DET1Q7L5Y6 550 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 PLXDC1Q8IUK5 500 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 COG1Q8WTW3 980 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 NCSTNQ92542 709 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 HDAC10Q969S8 669 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 DCBLD2Q96PD2 775 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 NAP1L3Q99457 506 aaPredicted RBP12.93□□□□□ -0.34
SMAD3-213ENST00000560175 CCM2Q9BSQ5 444 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 TREX1Q9NSU2 369 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 AKAP7Q9P0M2 348 aaPredicted RBP12.93□□□□□ -0.34
SMAD3-213ENST00000560175 PISDQ9UG56 409 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 SLC2A6Q9UGQ3 507 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 SNX12Q9UMY4 172 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 LHX6Q9UPM6 363 aa12.93□□□□□ -0.34
SMAD3-213ENST00000560175 TCRBV7S3A2A0A539 114 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 OR51F1A6NGY5 319 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 KIF5CO60282 957 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 MTHFD1P11586 935 aaKnown RBP12.92□□□□□ -0.34
SMAD3-213ENST00000560175 CD82P27701 267 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 COILP38432 576 aaPredicted RBP12.92□□□□□ -0.34
SMAD3-213ENST00000560175 CD151P48509 253 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 LMAN1P49257 510 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 MC2RQ01718 297 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 CCDC173Q0VFZ6 552 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 RPA4Q13156 261 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 CLN3Q13286 438 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 KCNJ11Q14654 390 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 LYPLAL1Q5VWZ2 237 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 CERS6Q6ZMG9 384 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 GSTA5Q7RTV2 222 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 TRIM48Q8IWZ4 208 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 CFAP206Q8IYR0 622 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 LILRA3Q8N6C8 439 aaPredicted RBP12.92□□□□□ -0.34
SMAD3-213ENST00000560175 CLDN19Q8N6F1 224 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 GPR150Q8NGU9 434 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 OR4L1Q8NH43 312 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 NAT14Q8WUY8 206 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 KCNE4Q8WWG9 221 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 USP7Q93009 1102 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 MAGOHBQ96A72 148 aaKnown RBP12.92□□□□□ -0.34
SMAD3-213ENST00000560175 CXorf40BQ96DE9 158 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 C9orf72Q96LT7 481 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 TAAR9Q96RI9 348 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 KIFC1Q9BW19 673 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 DDA1Q9BW61 102 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 IL22Q9GZX6 179 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 WWP1Q9H0M0 922 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 OR52A5Q9H2C5 316 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 MRM3Q9HC36 420 aaKnown RBP12.92□□□□□ -0.34
SMAD3-213ENST00000560175 FBXO8Q9NRD0 319 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 CHRAC1Q9NRG0 131 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 TRMT1Q9NXH9 659 aaKnown RBP12.92□□□□□ -0.34
SMAD3-213ENST00000560175 PSMD13Q9UNM6 376 aa12.92□□□□□ -0.34
SMAD3-213ENST00000560175 SMG1Q96Q15 3661 aaKnown RBP12.92□□□□□ -0.34
SMAD3-213ENST00000560175 USP27XA6NNY8 438 aa12.91□□□□□ -0.34
SMAD3-213ENST00000560175 PGRMC1O00264 195 aaKnown RBP12.91□□□□□ -0.34
SMAD3-213ENST00000560175 QSOX1O00391 747 aa12.91□□□□□ -0.34
SMAD3-213ENST00000560175 PRAMEF10O60809 474 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms