RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 PDGFAP04085 211 aa12.8□□□□□ -0.36
TPM1-220ENST00000559556 EBLN1P0CF75 366 aa12.8□□□□□ -0.36
TPM1-220ENST00000559556 MTHFD1P11586 935 aaKnown RBP12.8□□□□□ -0.36
TPM1-220ENST00000559556 NFKB1P19838 968 aa12.8□□□□□ -0.36
TPM1-220ENST00000559556 PTPN4P29074 926 aa12.8□□□□□ -0.36
TPM1-220ENST00000559556 CDKN2BP42772 138 aa12.8□□□□□ -0.36
TPM1-220ENST00000559556 WNT3AP56704 352 aa12.8□□□□□ -0.36
TPM1-220ENST00000559556 ACY1Q03154 408 aa12.8□□□□□ -0.36
TPM1-220ENST00000559556 WASHC5Q12768 1159 aa12.8□□□□□ -0.36
TPM1-220ENST00000559556 ITGA9Q13797 1035 aa12.8□□□□□ -0.36
TPM1-220ENST00000559556 NFE2L1Q14494 772 aa12.8□□□□□ -0.36
TPM1-220ENST00000559556 PLCL1Q15111 1095 aa12.8□□□□□ -0.36
TPM1-220ENST00000559556 GPRC6AQ5T6X5 926 aa12.8□□□□□ -0.36
TPM1-220ENST00000559556 MFSD7Q6UXD7 560 aa12.8□□□□□ -0.36
TPM1-220ENST00000559556 FAM151BQ6UXP7 276 aa12.8□□□□□ -0.36
TPM1-220ENST00000559556 ZNF517Q6ZMY9 492 aaPredicted RBP12.8□□□□□ -0.36
TPM1-220ENST00000559556 BZW1Q7L1Q6 419 aaKnown RBP12.8□□□□□ -0.36
TPM1-220ENST00000559556 GLT6D1Q7Z4J2 308 aa12.8□□□□□ -0.36
TPM1-220ENST00000559556 D2HGDHQ8N465 521 aa12.8□□□□□ -0.36
TPM1-220ENST00000559556 TFB1MQ8WVM0 346 aaKnown RBP12.8□□□□□ -0.36
TPM1-220ENST00000559556 THAP4Q8WY91 577 aa12.8□□□□□ -0.36
TPM1-220ENST00000559556 RNF25Q96BH1 459 aaPredicted RBP12.8□□□□□ -0.36
TPM1-220ENST00000559556 MRGPRX2Q96LB1 330 aa12.8□□□□□ -0.36
TPM1-220ENST00000559556 TRIM55Q9BYV6 548 aa12.8□□□□□ -0.36
TPM1-220ENST00000559556 DEF6Q9H4E7 631 aa12.8□□□□□ -0.36
TPM1-220ENST00000559556 AKIRIN1Q9H9L7 192 aaPredicted RBP12.8□□□□□ -0.36
TPM1-220ENST00000559556 PSMD13Q9UNM6 376 aa12.8□□□□□ -0.36
TPM1-220ENST00000559556 APCP25054 2843 aa12.8□□□□□ -0.36
TPM1-220ENST00000559556 CPAMD8Q8IZJ3 1885 aa12.8□□□□□ -0.36
TPM1-220ENST00000559556 MYO7BQ6PIF6 2116 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 GLYATL1P3A0A0U1RQE8 302 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 OR5K3A6NET4 321 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 OR2AG2A6NM03 316 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 AKR1B10O60218 316 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 UGT1A9O60656 530 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 CPNE3O75131 537 aaKnown RBP12.79□□□□□ -0.36
TPM1-220ENST00000559556 POP7O75817 140 aaKnown RBP12.79□□□□□ -0.36
TPM1-220ENST00000559556 TPM3P06753 285 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 PECAM1P16284 738 aaPredicted RBP12.79□□□□□ -0.36
TPM1-220ENST00000559556 UGT1A6P19224 532 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 HLA-DPA1P20036 260 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 UGT1A1P22309 533 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 UGT1A4P22310 534 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 CA5AP35218 305 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 CHRNA4P43681 627 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 TNNT3P45378 269 aaPredicted RBP12.79□□□□□ -0.36
TPM1-220ENST00000559556 RPS18P62269 152 aaKnown RBP12.79□□□□□ -0.36
TPM1-220ENST00000559556 TUBB4BP68371 445 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 HSD11B2P80365 405 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 IL10RAQ13651 578 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 TUBB2AQ13885 445 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 TRIM14Q14142 442 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 TFDP2Q14188 446 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 SLC1A5Q15758 541 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 CHRNA6Q15825 494 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 PPP2R5EQ16537 467 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 ODF2Q5BJF6 829 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 DNTTIP2Q5QJE6 756 aaKnown RBP12.79□□□□□ -0.36
TPM1-220ENST00000559556 METRNLQ641Q3 311 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 FAM199XQ6PEV8 388 aaPredicted RBP12.79□□□□□ -0.36
TPM1-220ENST00000559556 CERS6Q6ZMG9 384 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 SYVN1Q86TM6 617 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 RHOT1Q8IXI2 618 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 CARFQ8N187 725 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 OR8K1Q8NGG5 319 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 OR8K5Q8NH50 307 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 ZFPM2Q8WW38 1151 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 OXNAD1Q96HP4 312 aaPredicted RBP12.79□□□□□ -0.36
TPM1-220ENST00000559556 RUFY1Q96T51 708 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 TUBB2BQ9BVA1 445 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 UGT1A7Q9HAW7 530 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 UGT1A10Q9HAW8 530 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 UGT1A8Q9HAW9 530 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 MLXIPLQ9NP71 852 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 LATS2Q9NRM7 1088 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 SAE1Q9UBE0 346 aaPredicted RBP12.79□□□□□ -0.36
TPM1-220ENST00000559556 BTRCQ9Y297 605 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 PCDHGA9Q9Y5G4 932 aaKnown RBP12.79□□□□□ -0.36
TPM1-220ENST00000559556 SCN2AQ99250 2005 aa12.79□□□□□ -0.36
TPM1-220ENST00000559556 TACC2O95359 2948 aa12.78□□□□□ -0.36
TPM1-220ENST00000559556 BLACEA4D250 179 aa12.78□□□□□ -0.36
TPM1-220ENST00000559556 KLHL33A6NCF5 533 aa12.78□□□□□ -0.36
TPM1-220ENST00000559556 ZBTB11O95625 1053 aaPredicted RBP12.78□□□□□ -0.36
TPM1-220ENST00000559556 SLC1A1P43005 524 aa12.78□□□□□ -0.36
TPM1-220ENST00000559556 MPP3Q13368 585 aa12.78□□□□□ -0.36
TPM1-220ENST00000559556 TCEAL1Q15170 157 aa12.78□□□□□ -0.36
TPM1-220ENST00000559556 PAPD7Q5XG87 772 aaKnown RBP12.78□□□□□ -0.36
TPM1-220ENST00000559556 CPZQ66K79 652 aa12.78□□□□□ -0.36
TPM1-220ENST00000559556 TMEM220Q6QAJ8 160 aa12.78□□□□□ -0.36
TPM1-220ENST00000559556 OOSP2Q86WS3 158 aa12.78□□□□□ -0.36
TPM1-220ENST00000559556 SLC25A41Q8N5S1 370 aa12.78□□□□□ -0.36
TPM1-220ENST00000559556 GALNT11Q8NCW6 608 aa12.78□□□□□ -0.36
TPM1-220ENST00000559556 BLOC1S5Q8TDH9 187 aa12.78□□□□□ -0.36
TPM1-220ENST00000559556 ZNF501Q96CX3 271 aaPredicted RBP12.78□□□□□ -0.36
TPM1-220ENST00000559556 FCRL5Q96RD9 977 aa12.78□□□□□ -0.36
TPM1-220ENST00000559556 VAT1Q99536 393 aa12.78□□□□□ -0.36
TPM1-220ENST00000559556 KIR3DX1Q9H7L2 352 aa12.78□□□□□ -0.36
TPM1-220ENST00000559556 SPTLC3Q9NUV7 552 aa12.78□□□□□ -0.36
TPM1-220ENST00000559556 IMP3Q9NV31 184 aaKnown RBP12.78□□□□□ -0.36
TPM1-220ENST00000559556 PKP3Q9Y446 797 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms