RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 PREPP48147 710 aa18.33■□□□□ 0.52
CASC4-209ENST00000559222 BIRC2Q13490 618 aa18.33■□□□□ 0.52
CASC4-209ENST00000559222 KIR2DS5Q14953 304 aa18.33■□□□□ 0.52
CASC4-209ENST00000559222 ISXQ2M1V0 245 aa18.33■□□□□ 0.52
CASC4-209ENST00000559222 METRNLQ641Q3 311 aa18.33■□□□□ 0.52
CASC4-209ENST00000559222 UNQ6494/PRO21346Q6UXR6 183 aa18.33■□□□□ 0.52
CASC4-209ENST00000559222 WASH2PQ6VEQ5 465 aa18.33■□□□□ 0.52
CASC4-209ENST00000559222 RBM44Q6ZP01 1051 aaKnown RBP18.33■□□□□ 0.52
CASC4-209ENST00000559222 USP53Q70EK8 1073 aa18.33■□□□□ 0.52
CASC4-209ENST00000559222 HOOK3Q86VS8 718 aa18.33■□□□□ 0.52
CASC4-209ENST00000559222 CFAP206Q8IYR0 622 aa18.33■□□□□ 0.52
CASC4-209ENST00000559222 HM13Q8TCT9 377 aa18.33■□□□□ 0.52
CASC4-209ENST00000559222 TRIM44Q96DX7 344 aaPredicted RBP18.33■□□□□ 0.52
CASC4-209ENST00000559222 ATXN7L3BQ96GX2 97 aa18.33■□□□□ 0.52
CASC4-209ENST00000559222 DEPDC7Q96QD5 511 aa18.33■□□□□ 0.52
CASC4-209ENST00000559222 COG4Q9H9E3 785 aa18.33■□□□□ 0.52
CASC4-209ENST00000559222 SARS2Q9NP81 518 aaKnown RBP18.33■□□□□ 0.52
CASC4-209ENST00000559222 WASH6PQ9NQA3 447 aa18.33■□□□□ 0.52
CASC4-209ENST00000559222 SAMD15Q9P1V8 674 aa18.33■□□□□ 0.52
CASC4-209ENST00000559222 MAD1L1Q9Y6D9 718 aa18.33■□□□□ 0.52
CASC4-209ENST00000559222 CEP295Q9C0D2 2601 aa18.32■□□□□ 0.52
CASC4-209ENST00000559222 FAM237BA0A1B0GVD1 139 aa18.32■□□□□ 0.52
CASC4-209ENST00000559222 TRABD2BA6NFA1 517 aa18.32■□□□□ 0.52
CASC4-209ENST00000559222 HOXB3P14651 431 aaPredicted RBP18.32■□□□□ 0.52
CASC4-209ENST00000559222 VCLP18206 1134 aa18.32■□□□□ 0.52
CASC4-209ENST00000559222 PDHA2P29803 388 aa18.32■□□□□ 0.52
CASC4-209ENST00000559222 NSG1P42857 185 aa18.32■□□□□ 0.52
CASC4-209ENST00000559222 BRD3Q15059 726 aa18.32■□□□□ 0.52
CASC4-209ENST00000559222 TRADDQ15628 312 aa18.32■□□□□ 0.52
CASC4-209ENST00000559222 RPE65Q16518 533 aa18.32■□□□□ 0.52
CASC4-209ENST00000559222 BBS9Q3SYG4 887 aa18.32■□□□□ 0.52
CASC4-209ENST00000559222 ZNF789Q5FWF6 425 aa18.32■□□□□ 0.52
CASC4-209ENST00000559222 ZNF574Q6ZN55 896 aaPredicted RBP18.32■□□□□ 0.52
CASC4-209ENST00000559222 TMEM135Q86UB9 458 aa18.32■□□□□ 0.52
CASC4-209ENST00000559222 SLC9B2Q86UD5 537 aa18.32■□□□□ 0.52
CASC4-209ENST00000559222 KRT222Q8N1A0 295 aa18.32■□□□□ 0.52
CASC4-209ENST00000559222 OTUD6BQ8N6M0 293 aa18.32■□□□□ 0.52
CASC4-209ENST00000559222 MDM1Q8TC05 714 aa18.32■□□□□ 0.52
CASC4-209ENST00000559222 HEXDCQ8WVB3 486 aa18.32■□□□□ 0.52
CASC4-209ENST00000559222 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.32■□□□□ 0.524e-10■■■■■ 86.3
CASC4-209ENST00000559222 SNF8Q96H20 258 aa18.32■□□□□ 0.52
CASC4-209ENST00000559222 INSM2Q96T92 566 aaPredicted RBP18.32■□□□□ 0.52
CASC4-209ENST00000559222 NRTNQ99748 197 aa18.32■□□□□ 0.52
CASC4-209ENST00000559222 CCM2Q9BSQ5 444 aa18.32■□□□□ 0.52
CASC4-209ENST00000559222 SEMA6CQ9H3T2 930 aa18.32■□□□□ 0.52
CASC4-209ENST00000559222 KCNK4Q9NYG8 393 aa18.32■□□□□ 0.52
CASC4-209ENST00000559222 OGFRQ9NZT2 677 aa18.32■□□□□ 0.52
CASC4-209ENST00000559222 RPS6KL1Q9Y6S9 549 aa18.32■□□□□ 0.52
CASC4-209ENST00000559222 CFAP47Q6ZTR5 3102 aa18.31■□□□□ 0.52
CASC4-209ENST00000559222 CAPNS1P04632 268 aa18.31■□□□□ 0.52
CASC4-209ENST00000559222 SLC2A4P14672 509 aa18.31■□□□□ 0.52
CASC4-209ENST00000559222 XRCC1P18887 633 aaPredicted RBP18.31■□□□□ 0.52
CASC4-209ENST00000559222 MPSTP25325 297 aa18.31■□□□□ 0.52
CASC4-209ENST00000559222 MAPK9P45984 424 aa18.31■□□□□ 0.52
CASC4-209ENST00000559222 MORF4L2Q15014 288 aa18.31■□□□□ 0.52
CASC4-209ENST00000559222 PCGF5Q86SE9 256 aa18.31■□□□□ 0.52
CASC4-209ENST00000559222 STAMBPL1Q96FJ0 436 aa18.31■□□□□ 0.52
CASC4-209ENST00000559222 SLC38A3Q99624 504 aa18.31■□□□□ 0.52
CASC4-209ENST00000559222 P2RY12Q9H244 342 aa18.31■□□□□ 0.52
CASC4-209ENST00000559222 OR52A5Q9H2C5 316 aa18.31■□□□□ 0.52
CASC4-209ENST00000559222 IMP3Q9NV31 184 aaKnown RBP18.31■□□□□ 0.52
CASC4-209ENST00000559222 GRHL1Q9NZI5 618 aa18.31■□□□□ 0.52
CASC4-209ENST00000559222 ADAMTS20P59510 1910 aa18.31■□□□□ 0.52
CASC4-209ENST00000559222 ACACBO00763 2458 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 OR5K4A6NMS3 321 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 KCNJ13O60928 360 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 TCEA3O75764 348 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 AP2A2O94973 939 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 VIPP01282 170 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 GPR3P46089 330 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 CSE1LP55060 971 aaKnown RBP18.3■□□□□ 0.52
CASC4-209ENST00000559222 GPR18Q14330 331 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 FASTKD3Q14CZ7 662 aaKnown RBP18.3■□□□□ 0.52
CASC4-209ENST00000559222 TYSND1Q2T9J0 566 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 MAP9Q49MG5 647 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 CTSL3PQ5NE16 218 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 LYPLAL1Q5VWZ2 237 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 CERS6Q6ZMG9 384 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 TMEM26Q6ZUK4 368 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 CENPUQ71F23 418 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 SLITRK4Q8IW52 837 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 DENND6AQ8IWF6 608 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 TRIM48Q8IWZ4 208 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 CACTIN-AS1Q8N1I8 211 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 CXorf40BQ96DE9 158 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 C12orf66Q96MD2 445 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 EPB41L5Q9HCM4 733 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 SLC40A1Q9NP59 571 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 SLC17A6Q9P2U8 582 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 ANAPC5Q9UJX4 755 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 CHMP2BQ9UQN3 213 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 MRFAP1Q9Y605 127 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 WDFY3Q8IZQ1 3526 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 ASPMQ8IZT6 3477 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 CHD8Q9HCK8 2581 aa18.3■□□□□ 0.52
CASC4-209ENST00000559222 FAM187AA6NFU0 413 aa18.29■□□□□ 0.52
CASC4-209ENST00000559222 USP1O94782 785 aa18.29■□□□□ 0.52
CASC4-209ENST00000559222 MPOP05164 745 aa18.29■□□□□ 0.52
CASC4-209ENST00000559222 MTHFD1P11586 935 aaKnown RBP18.29■□□□□ 0.52
CASC4-209ENST00000559222 ELK3P41970 407 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms