RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 ZNF514Q96K75 400 aaPredicted RBP15.59■□□□□ 0.09
SCFD1-224ENST00000557713 INSM2Q96T92 566 aaPredicted RBP15.59■□□□□ 0.09
SCFD1-224ENST00000557713 TRIM55Q9BYV6 548 aa15.59■□□□□ 0.09
SCFD1-224ENST00000557713 NHEJ1Q9H9Q4 299 aaPredicted RBP15.59■□□□□ 0.09
SCFD1-224ENST00000557713 FGF21Q9NSA1 209 aa15.59■□□□□ 0.09
SCFD1-224ENST00000557713 ZNHIT6Q9NWK9 470 aaKnown RBP15.59■□□□□ 0.09
SCFD1-224ENST00000557713 OR5K3A6NET4 321 aa15.58■□□□□ 0.08
SCFD1-224ENST00000557713 OR2AG2A6NM03 316 aa15.58■□□□□ 0.08
SCFD1-224ENST00000557713 BUD23O43709 281 aaKnown RBP15.58■□□□□ 0.08
SCFD1-224ENST00000557713 DNAJB5O75953 348 aa15.58■□□□□ 0.08
SCFD1-224ENST00000557713 TPM3P06753 285 aa15.58■□□□□ 0.08
SCFD1-224ENST00000557713 MTHFD1P11586 935 aaKnown RBP15.58■□□□□ 0.08
SCFD1-224ENST00000557713 COMTP21964 271 aa15.58■□□□□ 0.08
SCFD1-224ENST00000557713 PTPN4P29074 926 aa15.58■□□□□ 0.08
SCFD1-224ENST00000557713 HSD11B2P80365 405 aa15.58■□□□□ 0.08
SCFD1-224ENST00000557713 ITGA9Q13797 1035 aa15.58■□□□□ 0.08
SCFD1-224ENST00000557713 TRIM14Q14142 442 aa15.58■□□□□ 0.08
SCFD1-224ENST00000557713 UGT8Q16880 541 aa15.58■□□□□ 0.08
SCFD1-224ENST00000557713 DNTTIP2Q5QJE6 756 aaKnown RBP15.58■□□□□ 0.08
SCFD1-224ENST00000557713 SPOCD1Q6ZMY3 1216 aa15.58■□□□□ 0.08
SCFD1-224ENST00000557713 PID1Q7Z2X4 250 aa15.58■□□□□ 0.08
SCFD1-224ENST00000557713 GLT6D1Q7Z4J2 308 aa15.58■□□□□ 0.08
SCFD1-224ENST00000557713 ATCAYQ86WG3 371 aa15.58■□□□□ 0.08
SCFD1-224ENST00000557713 BLOC1S5Q8TDH9 187 aa15.58■□□□□ 0.08
SCFD1-224ENST00000557713 ZFPM2Q8WW38 1151 aa15.58■□□□□ 0.08
SCFD1-224ENST00000557713 SEC14L1Q92503 715 aa15.58■□□□□ 0.08
SCFD1-224ENST00000557713 CCDC42Q96M95 316 aa15.58■□□□□ 0.08
SCFD1-224ENST00000557713 CD180Q99467 661 aa15.58■□□□□ 0.08
SCFD1-224ENST00000557713 ABHD10Q9NUJ1 306 aa15.58■□□□□ 0.08
SCFD1-224ENST00000557713 SMOXQ9NWM0 555 aa15.58■□□□□ 0.08
SCFD1-224ENST00000557713 HRASLS2Q9NWW9 162 aa15.58■□□□□ 0.08
SCFD1-224ENST00000557713 LRRK2Q5S007 2527 aa15.58■□□□□ 0.08
SCFD1-224ENST00000557713 UBA6A0AVT1 1052 aaPredicted RBP15.57■□□□□ 0.08
SCFD1-224ENST00000557713 TLCD2A6NGC4 264 aa15.57■□□□□ 0.08
SCFD1-224ENST00000557713 HLA-DPA1P20036 260 aa15.57■□□□□ 0.08
SCFD1-224ENST00000557713 ARL4DP49703 201 aa15.57■□□□□ 0.08
SCFD1-224ENST00000557713 RPS18P62269 152 aaKnown RBP15.57■□□□□ 0.08
SCFD1-224ENST00000557713 MPP3Q13368 585 aa15.57■□□□□ 0.08
SCFD1-224ENST00000557713 PTPRCAPQ14761 206 aa15.57■□□□□ 0.08
SCFD1-224ENST00000557713 PLCL1Q15111 1095 aa15.57■□□□□ 0.08
SCFD1-224ENST00000557713 LLGL1Q15334 1064 aa15.57■□□□□ 0.08
SCFD1-224ENST00000557713 FNBP1LQ5T0N5 605 aa15.57■□□□□ 0.08
SCFD1-224ENST00000557713 ZNF517Q6ZMY9 492 aaPredicted RBP15.57■□□□□ 0.08
SCFD1-224ENST00000557713 BEND7Q8N7W2 519 aaPredicted RBP15.57■□□□□ 0.08
SCFD1-224ENST00000557713 ZNF398Q8TD17 642 aa15.57■□□□□ 0.08
SCFD1-224ENST00000557713 THAP4Q8WY91 577 aa15.57■□□□□ 0.08
SCFD1-224ENST00000557713 ZNF501Q96CX3 271 aaPredicted RBP15.57■□□□□ 0.08
SCFD1-224ENST00000557713 VAT1Q99536 393 aa15.57■□□□□ 0.08
SCFD1-224ENST00000557713 WWP1Q9H0M0 922 aa15.57■□□□□ 0.08
SCFD1-224ENST00000557713 IMP3Q9NV31 184 aaKnown RBP15.57■□□□□ 0.08
SCFD1-224ENST00000557713 KLHL8Q9P2G9 620 aaPredicted RBP15.57■□□□□ 0.08
SCFD1-224ENST00000557713 INTUQ9ULD6 942 aa15.57■□□□□ 0.08
SCFD1-224ENST00000557713 FARSAQ9Y285 508 aaKnown RBP15.57■□□□□ 0.08
SCFD1-224ENST00000557713 PKP3Q9Y446 797 aa15.57■□□□□ 0.08
SCFD1-224ENST00000557713 CFAP20Q9Y6A4 193 aaKnown RBP15.57■□□□□ 0.08
SCFD1-224ENST00000557713 MGAT4DA6NG13 374 aa15.56■□□□□ 0.08
SCFD1-224ENST00000557713 F5H423 210 aaPredicted RBP15.56■□□□□ 0.08
SCFD1-224ENST00000557713 SPOPO43791 374 aa15.56■□□□□ 0.08
SCFD1-224ENST00000557713 TNNT3P45378 269 aaPredicted RBP15.56■□□□□ 0.08
SCFD1-224ENST00000557713 RPS15P62841 145 aaKnown RBP15.56■□□□□ 0.08
SCFD1-224ENST00000557713 TUBB4BP68371 445 aa15.56■□□□□ 0.08
SCFD1-224ENST00000557713 XRCC4Q13426 336 aa15.56■□□□□ 0.08
SCFD1-224ENST00000557713 TUBB2AQ13885 445 aa15.56■□□□□ 0.08
SCFD1-224ENST00000557713 LONRF2Q1L5Z9 754 aa15.56■□□□□ 0.08
SCFD1-224ENST00000557713 KAZNQ674X7 775 aa15.56■□□□□ 0.08
SCFD1-224ENST00000557713 SYVN1Q86TM6 617 aa15.56■□□□□ 0.08
SCFD1-224ENST00000557713 ZC3H18Q86VM9 953 aaKnown RBP15.56■□□□□ 0.08
SCFD1-224ENST00000557713 CARFQ8N187 725 aa15.56■□□□□ 0.08
SCFD1-224ENST00000557713 SLC38A9Q8NBW4 561 aa15.56■□□□□ 0.08
SCFD1-224ENST00000557713 IPMKQ8NFU5 416 aa15.56■□□□□ 0.08
SCFD1-224ENST00000557713 OR2L2Q8NH16 312 aa15.56■□□□□ 0.08
SCFD1-224ENST00000557713 P3H4Q92791 437 aa15.56■□□□□ 0.08
SCFD1-224ENST00000557713 TUBB2BQ9BVA1 445 aa15.56■□□□□ 0.08
SCFD1-224ENST00000557713 MLXIPLQ9NP71 852 aa15.56■□□□□ 0.08
SCFD1-224ENST00000557713 KCND1Q9NSA2 647 aa15.56■□□□□ 0.08
SCFD1-224ENST00000557713 SLC24A2Q9UI40 661 aa15.56■□□□□ 0.08
SCFD1-224ENST00000557713 ACSL5Q9ULC5 683 aa15.56■□□□□ 0.08
SCFD1-224ENST00000557713 ALG6Q9Y672 507 aa15.56■□□□□ 0.08
SCFD1-224ENST00000557713 NBASA2RRP1 2371 aa15.56■□□□□ 0.08
SCFD1-224ENST00000557713 OR6C74A6NCV1 312 aa15.55■□□□□ 0.08
SCFD1-224ENST00000557713 STX7O15400 261 aaKnown RBP15.55■□□□□ 0.08
SCFD1-224ENST00000557713 PSTPIP1O43586 416 aa15.55■□□□□ 0.08
SCFD1-224ENST00000557713 SGTAO43765 313 aa15.55■□□□□ 0.08
SCFD1-224ENST00000557713 CPNE3O75131 537 aaKnown RBP15.55■□□□□ 0.08
SCFD1-224ENST00000557713 SCRG1O75711 98 aa15.55■□□□□ 0.08
SCFD1-224ENST00000557713 ZBTB11O95625 1053 aaPredicted RBP15.55■□□□□ 0.08
SCFD1-224ENST00000557713 AGTP01019 485 aa15.55■□□□□ 0.08
SCFD1-224ENST00000557713 MSH3P20585 1137 aa15.55■□□□□ 0.08
SCFD1-224ENST00000557713 PBLDP30039 288 aaPredicted RBP15.55■□□□□ 0.08
SCFD1-224ENST00000557713 PDE1BQ01064 536 aa15.55■□□□□ 0.08
SCFD1-224ENST00000557713 GPS2Q13227 327 aa15.55■□□□□ 0.08
SCFD1-224ENST00000557713 IL10RAQ13651 578 aa15.55■□□□□ 0.08
SCFD1-224ENST00000557713 GPR19Q15760 415 aa15.55■□□□□ 0.08
SCFD1-224ENST00000557713 TFDP3Q5H9I0 405 aa15.55■□□□□ 0.08
SCFD1-224ENST00000557713 IZUMO3Q5VZ72 239 aa15.55■□□□□ 0.08
SCFD1-224ENST00000557713 PAPD7Q5XG87 772 aaKnown RBP15.55■□□□□ 0.08
SCFD1-224ENST00000557713 DUS1LQ6P1R4 473 aaKnown RBP15.55■□□□□ 0.08
SCFD1-224ENST00000557713 DET1Q7L5Y6 550 aa15.55■□□□□ 0.08
SCFD1-224ENST00000557713 OOSP2Q86WS3 158 aa15.55■□□□□ 0.08
SCFD1-224ENST00000557713 VSTM4Q8IW00 320 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms