RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 NDUFAF2Q8N183 169 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 ELMOD1Q8N336 334 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 MPP5Q8N3R9 675 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 GBP7Q8N8V2 638 aaPredicted RBP4.47□□□□□ -1.69
SRP54-212ENST00000556992 PPHLN1Q8NEY8 458 aaKnown RBP4.47□□□□□ -1.69
SRP54-212ENST00000556992 GDAP1Q8TB36 358 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 RAB3IL1Q8TBN0 382 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 PHOSPHO2Q8TCD6 241 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 TCP10LQ8TDR4 215 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 DIS3LQ8TF46 1054 aaKnown RBP4.47□□□□□ -1.69
SRP54-212ENST00000556992 IGSF8Q969P0 613 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 PSMG2Q969U7 264 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 TMA16Q96EY4 203 aaKnown RBP4.47□□□□□ -1.69
SRP54-212ENST00000556992 HMCESQ96FZ2 354 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 IMP4Q96G21 291 aaKnown RBP4.47□□□□□ -1.69
SRP54-212ENST00000556992 CERS2Q96G23 380 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 APOPT1Q96IL0 206 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 SERAC1Q96JX3 654 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 SRPK1Q96SB4 655 aaKnown RBP4.47□□□□□ -1.69
SRP54-212ENST00000556992 RAD9AQ99638 391 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 FSD1LQ9BXM9 530 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 TEX101Q9BY14 249 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 TOR3AQ9H497 397 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 MRM3Q9HC36 420 aaKnown RBP4.47□□□□□ -1.69
SRP54-212ENST00000556992 TRIM39Q9HCM9 518 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 CHRAC1Q9NRG0 131 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 C20orf96Q9NUD7 363 aaPredicted RBP4.47□□□□□ -1.69
SRP54-212ENST00000556992 SYBUQ9NX95 663 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 MKS1Q9NXB0 559 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 STOML2Q9UJZ1 356 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 LZTS1Q9Y250 596 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 ZNF510Q9Y2H8 683 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 TBC1D30Q9Y2I9 924 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 ARL2BPQ9Y2Y0 163 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 PLLPQ9Y342 182 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 USP15Q9Y4E8 981 aaPredicted RBP4.47□□□□□ -1.69
SRP54-212ENST00000556992 YIPF1Q9Y548 306 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 MRPL42Q9Y6G3 142 aaKnown RBP4.47□□□□□ -1.69
SRP54-212ENST00000556992 ATXN2Q99700 1313 aaKnown RBP4.46□□□□□ -1.69
SRP54-212ENST00000556992 PIEZO1Q92508 2521 aa4.46□□□□□ -1.69
SRP54-212ENST00000556992 BDP1A6H8Y1 2624 aa4.46□□□□□ -1.69
SRP54-212ENST00000556992 SCN10AQ9Y5Y9 1956 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 DOCK5Q9H7D0 1870 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 ZCWPW2A0A1B0GU75 182 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 LOC285095A0A1B0GVY8 99 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 HEATR9A2RTY3 570 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 H3BNC9 293 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 GOLGA8RI6L899 631 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 J3KR12 359 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 LEFTY2O00292 366 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 TEX28O15482 410 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 USP12O75317 370 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 PIAS1O75925 651 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 NCR1O76036 304 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 GJB5O95377 273 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 TGDSO95455 350 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 IL1BP01584 269 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 KLKB1P03952 638 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 GSTA1P08263 222 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 ITGA2BP08514 1039 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 DHRS4L1P0CG22 281 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 TROVE2P10155 538 aaKnown RBP eCLIP4.46□□□□□ -1.7
SRP54-212ENST00000556992 ERVK-10P10266 1014 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 CTSAP10619 480 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 ITGB8P26012 769 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 CRABP2P29373 138 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 TYK2P29597 1187 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 BMPR1AP36894 532 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 CASRP41180 1078 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 SERPINH1P50454 418 aaKnown RBP4.46□□□□□ -1.7
SRP54-212ENST00000556992 NEK3P51956 506 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 CSE1LP55060 971 aaKnown RBP4.46□□□□□ -1.7
SRP54-212ENST00000556992 KRTAP10-11P60412 298 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 CRADDP78560 199 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 DEFB103AP81534 67 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 HTRA4P83105 476 aaPredicted RBP4.46□□□□□ -1.7
SRP54-212ENST00000556992 FPGSQ05932 587 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 CDK18Q07002 472 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 NSUN2Q08J23 767 aaKnown RBP eCLIP4.46□□□□□ -1.7
SRP54-212ENST00000556992 NIPAL4Q0D2K0 466 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 SLC10A7Q0GE19 358 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 TWF1Q12792 350 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 THOC5Q13769 683 aaKnown RBP4.46□□□□□ -1.7
SRP54-212ENST00000556992 ZNF235Q14590 738 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 SLC1A5Q15758 541 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 CCDC153Q494R4 210 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 LACTB2Q53H82 288 aaPredicted RBP4.46□□□□□ -1.7
SRP54-212ENST00000556992 HSP90AA5PQ58FG0 334 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 MPP7Q5T2T1 576 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 TEDDM1Q5T9Z0 273 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 IL31Q6EBC2 164 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 NADSYN1Q6IA69 706 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 NEPROQ6NW34 567 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 KDELC1Q6UW63 502 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 PACS1Q6VY07 963 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 KIAA0408Q6ZU52 694 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 BMP8AQ7Z5Y6 402 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 STRA8Q7Z7C7 330 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 RASSF3Q86WH2 238 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 NUDCD3Q8IVD9 361 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms