RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 AMZ2Q86W34 360 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 TRAPPC5Q8IUR0 188 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 CLDN19Q8N6F1 224 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 BEND7Q8N7W2 519 aaPredicted RBP9.48□□□□□ -0.89
SRP54-210ENST00000556380 DCBLD1Q8N8Z6 715 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 OR2L2Q8NH16 312 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 MAPK15Q8TD08 544 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 SLC37A2Q8TED4 501 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 CCDC74AQ96AQ1 378 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 TTC25Q96NG3 672 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 CCDC3Q9BQI4 270 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 TRIM56Q9BRZ2 755 aaKnown RBP9.48□□□□□ -0.89
SRP54-210ENST00000556380 TRIM51Q9BSJ1 452 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 LRIT1Q9P2V4 623 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 ASIC3Q9UHC3 531 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 ANGPTL2Q9UKU9 493 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 WDR37Q9Y2I8 494 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 MSRB2Q9Y3D2 182 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 PRSS21Q9Y6M0 314 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 DMXL2Q8TDJ6 3036 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 MAP1BP46821 2468 aaKnown RBP9.48□□□□□ -0.89
SRP54-210ENST00000556380 USP24Q9UPU5 2620 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 UNC13CQ8NB66 2214 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 TRBV23OR9-2A0A075B6M9 112 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 KIR2DS5A0A0G2JLQ3 304 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 A0A0G2JNG1 304 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 ZCWPW2A0A1B0GU75 182 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 C17orf113A0A1B0GUU1 675 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 FAM237BA0A1B0GVD1 139 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 FAM149AA5PLN7 773 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 OR5K4A6NMS3 321 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 KIR2DS3K7RE56 304 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 OR1I1O60431 355 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 SNX2O60749 519 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 AP2A2O94973 939 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 SEC31AO94979 1220 aaKnown RBP9.47□□□□□ -0.89
SRP54-210ENST00000556380 CAPNS1P04632 268 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 RALBP11234 206 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 XRCC1P18887 633 aaPredicted RBP9.47□□□□□ -0.89
SRP54-210ENST00000556380 AKT1P31749 480 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 GPR3P46089 330 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 PRLHRP49683 370 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 CCL7P80098 99 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 SQSTM1Q13501 440 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 NFE2L1Q14494 772 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 KIR2DS5Q14953 304 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 MORF4L2Q15014 288 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 INSCQ1MX18 579 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 PLA2G4EQ3MJ16 856 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 ANKRD20A4Q4UJ75 823 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 HES3Q5TGS1 186 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 LYPLAL1Q5VWZ2 237 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 IZUMO3Q5VZ72 239 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 KIAA0930Q6ICG6 404 aaPredicted RBP9.47□□□□□ -0.89
SRP54-210ENST00000556380 HIBCHQ6NVY1 386 aaPredicted RBP9.47□□□□□ -0.89
SRP54-210ENST00000556380 CERS6Q6ZMG9 384 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 SPRED1Q7Z699 444 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 IGDCC3Q8IVU1 814 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 GALNT15Q8N3T1 639 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 GPR150Q8NGU9 434 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 OR6P1Q8NGX9 317 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 GATA6Q92908 595 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 DCUN1D1Q96GG9 259 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 ERP44Q9BS26 406 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 PLAC1Q9HBJ0 212 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 SARS2Q9NP81 518 aaKnown RBP9.47□□□□□ -0.89
SRP54-210ENST00000556380 ZNF624Q9P2J8 865 aaPredicted RBP9.47□□□□□ -0.89
SRP54-210ENST00000556380 DNAJC16Q9Y2G8 782 aa9.47□□□□□ -0.89
SRP54-210ENST00000556380 KLHL33A6NCF5 533 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 CD3EAPO15446 510 aaKnown RBP9.46□□□□□ -0.9
SRP54-210ENST00000556380 RAD51CO43502 376 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 TCEA3O75764 348 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 VAPBO95292 243 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 ZIC2O95409 532 aaPredicted RBP9.46□□□□□ -0.9
SRP54-210ENST00000556380 VCLP18206 1134 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 IDSP22304 550 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 RPL10P27635 214 aaKnown RBP9.46□□□□□ -0.9
SRP54-210ENST00000556380 CD1CP29017 333 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 NSG1P42857 185 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 RPL21P46778 160 aaKnown RBP9.46□□□□□ -0.9
SRP54-210ENST00000556380 PDX1P52945 283 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 ITGA8P53708 1063 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 OR1D5P58170 312 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 PRAMEP78395 509 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 CFHR1Q03591 330 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 C2orf54Q08AI8 447 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 TARDBPQ13148 414 aaKnown RBP eCLIP9.46□□□□□ -0.9
SRP54-210ENST00000556380 CLCA4Q14CN2 919 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 WHAMMP3Q1A5X7 153 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 FASTKD1Q53R41 847 aaKnown RBP9.46□□□□□ -0.9
SRP54-210ENST00000556380 DUPD1Q68J44 220 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 MAATS1Q7Z4T9 603 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 LDB1Q86U70 411 aaPredicted RBP9.46□□□□□ -0.9
SRP54-210ENST00000556380 CCNJLQ8IV13 435 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 LILRA3Q8N6C8 439 aaPredicted RBP9.46□□□□□ -0.9
SRP54-210ENST00000556380 ITPKCQ96DU7 683 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 PWWP2AQ96N64 755 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 WDR83Q9BRX9 315 aaKnown RBP9.46□□□□□ -0.9
SRP54-210ENST00000556380 CCM2Q9BSQ5 444 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 ABCG4Q9H172 646 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms