RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 ZRANB2O95218 330 aaKnown RBP eCLIP12.99□□□□□ -0.33
TGFB3-204ENST00000556285 PDGFAP04085 211 aa12.99□□□□□ -0.33
TGFB3-204ENST00000556285 TPM1P09493 284 aa12.99□□□□□ -0.33
TGFB3-204ENST00000556285 EBLN1P0CF75 366 aa12.99□□□□□ -0.33
TGFB3-204ENST00000556285 HALP42357 657 aa12.99□□□□□ -0.33
TGFB3-204ENST00000556285 MAGEA1P43355 309 aa12.99□□□□□ -0.33
TGFB3-204ENST00000556285 ARCN1P48444 511 aaKnown RBP12.99□□□□□ -0.33
TGFB3-204ENST00000556285 MPP3Q13368 585 aa12.99□□□□□ -0.33
TGFB3-204ENST00000556285 TUBB3Q13509 450 aa12.99□□□□□ -0.33
TGFB3-204ENST00000556285 DNASE1L3Q13609 305 aa12.99□□□□□ -0.33
TGFB3-204ENST00000556285 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.99□□□□□ -0.33
TGFB3-204ENST00000556285 CRTC2Q53ET0 693 aaPredicted RBP12.99□□□□□ -0.33
TGFB3-204ENST00000556285 LDLRAP1Q5SW96 308 aa12.99□□□□□ -0.33
TGFB3-204ENST00000556285 FAM199XQ6PEV8 388 aaPredicted RBP12.99□□□□□ -0.33
TGFB3-204ENST00000556285 FBXO38Q6PIJ6 1188 aa12.99□□□□□ -0.33
TGFB3-204ENST00000556285 PPP1R3BQ86XI6 285 aa12.99□□□□□ -0.33
TGFB3-204ENST00000556285 LURAP1LQ8IV03 231 aa12.99□□□□□ -0.33
TGFB3-204ENST00000556285 RBM12BQ8IXT5 1001 aaKnown RBP12.99□□□□□ -0.33
TGFB3-204ENST00000556285 KATNAL2Q8IYT4 538 aa12.99□□□□□ -0.33
TGFB3-204ENST00000556285 LILRA3Q8N6C8 439 aaPredicted RBP12.99□□□□□ -0.33
TGFB3-204ENST00000556285 DTX3LQ8TDB6 740 aa12.99□□□□□ -0.33
TGFB3-204ENST00000556285 PPM1MQ96MI6 270 aa12.99□□□□□ -0.33
TGFB3-204ENST00000556285 APOL2Q9BQE5 337 aa12.99□□□□□ -0.33
TGFB3-204ENST00000556285 WWP1Q9H0M0 922 aa12.99□□□□□ -0.33
TGFB3-204ENST00000556285 IMP3Q9NV31 184 aaKnown RBP12.99□□□□□ -0.33
TGFB3-204ENST00000556285 HACD3Q9P035 362 aa12.99□□□□□ -0.33
TGFB3-204ENST00000556285 SEMA5BQ9P283 1151 aa12.99□□□□□ -0.33
TGFB3-204ENST00000556285 RSPH14Q9UHP6 348 aa12.99□□□□□ -0.33
TGFB3-204ENST00000556285 ANAPC2Q9UJX6 822 aa12.99□□□□□ -0.33
TGFB3-204ENST00000556285 LRRK2Q5S007 2527 aa12.99□□□□□ -0.33
TGFB3-204ENST00000556285 CCDC88CQ9P219 2028 aa12.98□□□□□ -0.33
TGFB3-204ENST00000556285 USP9XQ93008 2570 aaPredicted RBP12.98□□□□□ -0.33
TGFB3-204ENST00000556285 AKR1B15C9JRZ8 316 aaPredicted RBP12.98□□□□□ -0.33
TGFB3-204ENST00000556285 DDX3YO15523 660 aaKnown RBP12.98□□□□□ -0.33
TGFB3-204ENST00000556285 SGTAO43765 313 aa12.98□□□□□ -0.33
TGFB3-204ENST00000556285 NTRK1P04629 796 aa12.98□□□□□ -0.33
TGFB3-204ENST00000556285 MTHFD1P11586 935 aaKnown RBP12.98□□□□□ -0.33
TGFB3-204ENST00000556285 HLA-DPA1P20036 260 aa12.98□□□□□ -0.33
TGFB3-204ENST00000556285 RBL1P28749 1068 aa12.98□□□□□ -0.33
TGFB3-204ENST00000556285 HADHBP55084 474 aaKnown RBP12.98□□□□□ -0.33
TGFB3-204ENST00000556285 RPS18P62269 152 aaKnown RBP12.98□□□□□ -0.33
TGFB3-204ENST00000556285 LACTB2Q53H82 288 aaPredicted RBP12.98□□□□□ -0.33
TGFB3-204ENST00000556285 ZDHHC20Q5W0Z9 365 aa12.98□□□□□ -0.33
TGFB3-204ENST00000556285 METRNLQ641Q3 311 aa12.98□□□□□ -0.33
TGFB3-204ENST00000556285 CCDC50Q8IVM0 306 aa12.98□□□□□ -0.33
TGFB3-204ENST00000556285 RCOR2Q8IZ40 523 aa12.98□□□□□ -0.33
TGFB3-204ENST00000556285 SIDT2Q8NBJ9 832 aaKnown RBP12.98□□□□□ -0.33
TGFB3-204ENST00000556285 OR4K2Q8NGD2 314 aa12.98□□□□□ -0.33
TGFB3-204ENST00000556285 ZNF398Q8TD17 642 aa12.98□□□□□ -0.33
TGFB3-204ENST00000556285 NRTNQ99748 197 aa12.98□□□□□ -0.33
TGFB3-204ENST00000556285 FAM118BQ9BPY3 351 aa12.98□□□□□ -0.33
TGFB3-204ENST00000556285 TWSG1Q9GZX9 223 aa12.98□□□□□ -0.33
TGFB3-204ENST00000556285 TSPY26PQ9H489 355 aa12.98□□□□□ -0.33
TGFB3-204ENST00000556285 LHX9Q9NQ69 397 aa12.98□□□□□ -0.33
TGFB3-204ENST00000556285 FKBPLQ9UIM3 349 aa12.98□□□□□ -0.33
TGFB3-204ENST00000556285 PADI1Q9ULC6 663 aa12.98□□□□□ -0.33
TGFB3-204ENST00000556285 MAN2B2Q9Y2E5 1009 aa12.98□□□□□ -0.33
TGFB3-204ENST00000556285 PKP3Q9Y446 797 aa12.98□□□□□ -0.33
TGFB3-204ENST00000556285 PCDHB3Q9Y5E6 796 aa12.98□□□□□ -0.33
TGFB3-204ENST00000556285 SPTBP11277 2137 aa12.98□□□□□ -0.33
TGFB3-204ENST00000556285 ICE1Q9Y2F5 2266 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 PIPSLA2A3N6 862 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 OR6C74A6NCV1 312 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 OR5K3A6NET4 321 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 H7C0C1 242 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 STX7O15400 261 aaKnown RBP12.97□□□□□ -0.33
TGFB3-204ENST00000556285 KCNJ13O60928 360 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 CREG1O75629 220 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 DNAJB5O75953 348 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 PRAMEF1O95521 474 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 AKT1P31749 480 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 ADRA1AP35348 466 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 UQCRFS1P47985 274 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 ATP5OP48047 213 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 MLLT10P55197 1068 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 MSLNQ13421 630 aaPredicted RBP12.97□□□□□ -0.33
TGFB3-204ENST00000556285 XRCC4Q13426 336 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 ITGA9Q13797 1035 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 PLCL1Q15111 1095 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 GPR19Q15760 415 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 BBS12Q6ZW61 710 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 DAAM2Q86T65 1068 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 CNGA4Q8IV77 575 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 TC2NQ8N9U0 490 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 UBXN4Q92575 508 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 MIB2Q96AX9 1013 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 C12orf66Q96MD2 445 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 VAT1Q99536 393 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 FSD1LQ9BXM9 530 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 TRIM55Q9BYV6 548 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 ZCCHC2Q9C0B9 1178 aaKnown RBP12.97□□□□□ -0.33
TGFB3-204ENST00000556285 GBA3Q9H227 469 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 ACTL8Q9H568 366 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 FAM96AQ9H5X1 160 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 PDE7BQ9NP56 450 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 FGF21Q9NSA1 209 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 SMOXQ9NWM0 555 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 HRASLS2Q9NWW9 162 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 TLK1Q9UKI8 766 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 RARRES3Q9UL19 164 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms