RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 TMEM35AQ53FP2 167 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 PLEKHS1Q5SXH7 462 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 GKAP1Q5VSY0 366 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-218ENST00000556256 PQLC2Q6ZP29 291 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 CFAP77Q6ZQR2 320 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 SEPT14Q6ZU15 432 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 ANO5Q75V66 913 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 GSTA5Q7RTV2 222 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 SZRD1Q7Z422 152 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 TSPAN33Q86UF1 283 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 HAPLN4Q86UW8 402 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 POMGNT1Q8WZA1 660 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 SGCDQ92629 289 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 IGSF8Q969P0 613 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 FAM120BQ96EK7 910 aaKnown RBP2.91□□□□□ -1.94
SCFD1-218ENST00000556256 PGAM5Q96HS1 289 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 ABHD8Q96I13 439 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 TMEM68Q96MH6 324 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 CMTM3Q96MX0 182 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 SEPT5Q99719 369 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-218ENST00000556256 IFIH1Q9BYX4 1025 aaKnown RBP2.91□□□□□ -1.94
SCFD1-218ENST00000556256 RANGRFQ9HD47 186 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-218ENST00000556256 HAUS2Q9NVX0 235 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 ACAD8Q9UKU7 415 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 EXOGQ9Y2C4 368 aaKnown RBP2.91□□□□□ -1.94
SCFD1-218ENST00000556256 RSF1Q96T23 1441 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-218ENST00000556256 A6NL46 340 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 PTGES3LE9PB15 166 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 AP3D1O14617 1153 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 AHCYL1O43865 530 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 NDUFS3O75489 264 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 DAB1O75553 588 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 GJB3O75712 270 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 SLC25A12O75746 678 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 CSH1P0DML2 217 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 CSH2P0DML3 217 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 PORP16435 677 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-218ENST00000556256 IL7RP16871 459 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 DDX5P17844 614 aaKnown RBP2.9□□□□□ -1.95
SCFD1-218ENST00000556256 ACADLP28330 430 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 PPARGP37231 505 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-218ENST00000556256 AMPHP49418 695 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 METAP2P50579 478 aaKnown RBP eCLIP2.9□□□□□ -1.95
SCFD1-218ENST00000556256 CDH8P55286 799 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 SORDQ00796 357 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 MC1RQ01726 317 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 PDE1CQ14123 709 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-218ENST00000556256 CRYMQ14894 314 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 PCGF3Q3KNV8 242 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 TMEM154Q6P9G4 183 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 DPPA4Q7L190 304 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 CHST9Q7L1S5 443 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 TICAM1Q8IUC6 712 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 C11orf53Q8IXP5 236 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 LMNTD2Q8IXW0 634 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 RNF168Q8IYW5 571 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-218ENST00000556256 SPATA6LQ8N4H0 392 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 RRNAD1Q96FB5 475 aaKnown RBP2.9□□□□□ -1.95
SCFD1-218ENST00000556256 OR2A14Q96R47 310 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 CCDC68Q9H2F9 335 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 KAT14Q9H8E8 782 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 HINT3Q9NQE9 182 aaKnown RBP2.9□□□□□ -1.95
SCFD1-218ENST00000556256 SETD4Q9NVD3 440 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 PRO0461Q9UI25 63 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 ERVK-11Q9UQG0 969 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 MTMR6Q9Y217 621 aa2.9□□□□□ -1.95
SCFD1-218ENST00000556256 ZCWPW2A0A1B0GU75 182 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 DUXAA6NLW8 204 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 ZFAND5O76080 213 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 TSHBP01222 138 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 POLR2CP19387 275 aaPredicted RBP2.89□□□□□ -1.95
SCFD1-218ENST00000556256 ACSL1P33121 698 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 ARCN1P48444 511 aaKnown RBP2.89□□□□□ -1.95
SCFD1-218ENST00000556256 BMXP51813 675 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 ZBED6P86452 979 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 EPS8Q12929 822 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 KIAA1644Q3SXP7 199 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 RAB41Q5JT25 222 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 KIAA0930Q6ICG6 404 aaPredicted RBP2.89□□□□□ -1.95
SCFD1-218ENST00000556256 METTL2BQ6P1Q9 378 aaKnown RBP2.89□□□□□ -1.95
SCFD1-218ENST00000556256 CLEC17AQ6ZS10 378 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 CCDC13Q8IYE1 715 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 HACE1Q8IYU2 909 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 NME8Q8N427 588 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 OR5R1Q8NH85 324 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 OR14L1PQ8NHC6 308 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 TRPC4APQ8TEL6 797 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 METTL2AQ96IZ6 378 aaKnown RBP2.89□□□□□ -1.95
SCFD1-218ENST00000556256 ACOX2Q99424 681 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 SH3GL2Q99962 352 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 SH2D4AQ9H788 454 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 PPP1R3EQ9H7J1 279 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 PELI2Q9HAT8 420 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 RRP7BPQ9NSQ0 103 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 ADD3Q9UEY8 706 aaKnown RBP2.89□□□□□ -1.95
SCFD1-218ENST00000556256 FBXL17Q9UF56 701 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 SESN1Q9Y6P5 492 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 MAU2Q9Y6X3 613 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 PTPRCP08575 1304 aa2.89□□□□□ -1.95
SCFD1-218ENST00000556256 ARHGEF40Q8TER5 1519 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms