RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 HMGCLP35914 325 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 RASSF2P50749 326 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 ZNF140P52738 457 aaPredicted RBP3.87□□□□□ -1.79
LINC00648-202ENST00000555985 HK3P52790 923 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 WNT3AP56704 352 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 DYNLT1P63172 113 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 XIAPP98170 497 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 IL9RQ01113 521 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 ACVR1Q04771 509 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 FOXD4Q12950 439 aaPredicted RBP3.87□□□□□ -1.79
LINC00648-202ENST00000555985 SGCGQ13326 291 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 PDE1CQ14123 709 aaPredicted RBP3.87□□□□□ -1.79
LINC00648-202ENST00000555985 PDPK2PQ6A1A2 396 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 Q6ZVL8 140 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 CDKL3Q8IVW4 592 aaPredicted RBP3.87□□□□□ -1.79
LINC00648-202ENST00000555985 PHACTR4Q8IZ21 702 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 UBL4BQ8N7F7 174 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 KDF1Q8NAX2 398 aaPredicted RBP3.87□□□□□ -1.79
LINC00648-202ENST00000555985 PPFIBP2Q8ND30 876 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 GPR26Q8NDV2 337 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 GPR156Q8NFN8 814 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 SNRNP27Q8WVK2 155 aaKnown RBP3.87□□□□□ -1.79
LINC00648-202ENST00000555985 BTN2A2Q8WVV5 523 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 SKA1Q96BD8 255 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 GRAMD1AQ96CP6 724 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 PDXPQ96GD0 296 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 MPP4Q96JB8 637 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 SRPK1Q96SB4 655 aaKnown RBP3.87□□□□□ -1.79
LINC00648-202ENST00000555985 ZNF184Q99676 751 aaPredicted RBP3.87□□□□□ -1.79
LINC00648-202ENST00000555985 C1QTNF7Q9BXJ2 289 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 MAK16Q9BXY0 300 aaKnown RBP3.87□□□□□ -1.79
LINC00648-202ENST00000555985 ZDHHC18Q9NUE0 388 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 IL17CQ9P0M4 197 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 ZNF148Q9UQR1 794 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 DRG1Q9Y295 367 aaKnown RBP3.87□□□□□ -1.79
LINC00648-202ENST00000555985 UTP11Q9Y3A2 253 aaKnown RBP3.87□□□□□ -1.79
LINC00648-202ENST00000555985 ZNF711Q9Y462 761 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 OR1A2Q9Y585 309 aa3.87□□□□□ -1.79
LINC00648-202ENST00000555985 OAS3Q9Y6K5 1087 aaKnown RBP3.87□□□□□ -1.79
LINC00648-202ENST00000555985 ZZEF1O43149 2961 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 EP300Q09472 2414 aaPredicted RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 IGLV3-16A0A075B6K0 115 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 TRBV5-4A0A0C4DH59 114 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 SPAARA0A1B0GVQ0 90 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 HTR3EA5X5Y0 456 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 MROH6A6NGR9 719 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 SMIM23A6NLE4 172 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 H7C0S8 307 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 NTN3O00634 580 aaPredicted RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 BIRC5O15392 142 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 AQP9O43315 295 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 SGTAO43765 313 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 METTL18O95568 372 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 ASMTLO95671 621 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 TROVE2P10155 538 aaKnown RBP eCLIP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 CDK4P11802 303 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 BPIP17213 487 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 CTPS1P17812 591 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 HLA-DPA1P20036 260 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 SERPINB3P29508 390 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 NOVA1P51513 510 aaKnown RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 EIF3EP60228 445 aaKnown RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 SRP54P61011 504 aaKnown RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 SQSTM1Q13501 440 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 GALNT3Q14435 633 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 SLC29A2Q14542 456 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 SUZ12Q15022 739 aaKnown RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 RCN1Q15293 331 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 CCNG2Q16589 344 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 CLPPQ16740 277 aaPredicted RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 CFAP157Q5JU67 520 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 KAZNQ674X7 775 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 IGF2-ASQ6U949 168 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 LYSMD3Q7Z3D4 306 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 PTAR1Q7Z6K3 402 aaPredicted RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 C11orf96Q7Z7L8 435 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 ZNF354CQ86Y25 554 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 GATAD2AQ86YP4 633 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 RIBC1Q8N443 379 aaPredicted RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 CCNYQ8ND76 341 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 OR56A4Q8NGH8 313 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 ERP27Q96DN0 273 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 WDR92Q96MX6 357 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 CDH19Q9H159 772 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 TRABDQ9H4I3 376 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 TBCCD1Q9NVR7 557 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 PTTG2Q9NZH5 202 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 MSRB2Q9Y3D2 182 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 SMIM31A0A1B0GVY4 71 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 A0A1W2PNU3 283 aaPredicted RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 TMEM120BA0PK00 339 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 PRSS38A1L453 326 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 GOLGA8CPA6NN73 597 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 GPR89AB7ZAQ6 455 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 YY2O15391 372 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 LDB2O43679 373 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 PCCBP05166 539 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 GPR89BP0CG08 455 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 RBP3P10745 1247 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms