RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 OR2L2Q8NH16 312 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 CD200R1Q8TD46 325 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 DNASE2BQ8WZ79 361 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 ISL2Q96A47 359 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 FAM136AQ96C01 138 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 LINGO1Q96FE5 620 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 ZC3H10Q96K80 434 aaKnown RBP11.02□□□□□ -0.65
SHMT2-220ENST00000555634 LINC00615Q96LM1 132 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-220ENST00000555634 MCMBPQ9BTE3 642 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 GSDMCQ9BYG8 508 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 CNOT10Q9H9A5 744 aaKnown RBP11.02□□□□□ -0.65
SHMT2-220ENST00000555634 KCNK9Q9NPC2 374 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 MKS1Q9NXB0 559 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 EURLQ9NYK6 297 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 GRID1Q9ULK0 1009 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 CNOT6Q9ULM6 557 aaKnown RBP11.02□□□□□ -0.65
SHMT2-220ENST00000555634 SUFUQ9UMX1 484 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 DOLKQ9UPQ8 538 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 TMEM98Q9Y2Y6 226 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 DHRS7Q9Y394 339 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 SPTY2D1-AS1A0A0U1RR47 76 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 MGAT4DA6NG13 374 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 SYCE1LA8MT33 242 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 GOLGA8RI6L899 631 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 TLR4O00206 839 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 CHUKO15111 745 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 VILLO15195 856 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 TM9SF1O15321 606 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 YKT6O15498 198 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 CFIP05156 583 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 F7P08709 466 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-220ENST00000555634 SLC35E2BP0CK96 405 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 CCDC166P0CW27 439 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 ACP5P13686 325 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 NR1D1P20393 614 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 IDSP22304 550 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 MAP4P27816 1152 aaKnown RBP11.01□□□□□ -0.65
SHMT2-220ENST00000555634 CCNFP41002 786 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 CDKN2DP55273 166 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 ASPHQ12797 758 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 SP140Q13342 867 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 CCDC153Q494R4 210 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 KHDC1Q4VXA5 237 aaKnown RBP11.01□□□□□ -0.65
SHMT2-220ENST00000555634 ZNF648Q5T619 568 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-220ENST00000555634 KCTD16Q68DU8 428 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 ZNF549Q6P9A3 640 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 CHST15Q7LFX5 561 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-220ENST00000555634 RD3Q7Z3Z2 195 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 ADAMTSL2Q86TH1 951 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 PIM3Q86V86 326 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 SYT12Q8IV01 421 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 HID1Q8IV36 788 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 MAML2Q8IZL2 1156 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-220ENST00000555634 ABCA7Q8IZY2 2146 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 C4orf33Q8N1A6 199 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 PELI3Q8N2H9 469 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 ZBTB44Q8NCP5 570 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 DYDC1Q8WWB3 177 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 PIGKQ92643 395 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 OLFM1Q99784 485 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 LGR4Q9BXB1 951 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 TRIM54Q9BYV2 358 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 STN1Q9H668 368 aaKnown RBP11.01□□□□□ -0.65
SHMT2-220ENST00000555634 DNAJC28Q9NX36 388 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 APOBEC3BQ9UH17 382 aaKnown RBP11.01□□□□□ -0.65
SHMT2-220ENST00000555634 TMPRSS11EQ9UL52 423 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 ACSL5Q9ULC5 683 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 CA5BQ9Y2D0 317 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 DGKBQ9Y6T7 804 aa11.01□□□□□ -0.65
SHMT2-220ENST00000555634 ATXN2Q99700 1313 aaKnown RBP11.01□□□□□ -0.65
SHMT2-220ENST00000555634 TDRD6O60522 2096 aaKnown RBP11□□□□□ -0.65
SHMT2-220ENST00000555634 TMEM202A6NGA9 273 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 IQCF5A8MTL0 148 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 PDZK1P1A8MUH7 402 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 AGPSO00116 658 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 BTN3A1O00481 513 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 PRPF4O43172 522 aaKnown RBP eCLIP11□□□□□ -0.651e-8■■■□□ 17.5
SHMT2-220ENST00000555634 DFNA5O60443 496 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 POP7O75817 140 aaKnown RBP11□□□□□ -0.65
SHMT2-220ENST00000555634 KLHL2O95198 593 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 CATP04040 527 aaKnown RBP11□□□□□ -0.65
SHMT2-220ENST00000555634 C2P06681 752 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 CEACAM5P06731 702 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 C8GP07360 202 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 SYPP08247 313 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 RBP1P09455 135 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 HIST1H2AGP0C0S8 130 aaPredicted RBP11□□□□□ -0.65
SHMT2-220ENST00000555634 NEFHP12036 1026 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 TAC1P20366 129 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 HIST1H2ADP20671 130 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 CYP2A7P20853 494 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 ITPKAP23677 461 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 MAOBP27338 520 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 AOAHP28039 575 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 MAGEA12P43365 314 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 CLCN7P51798 805 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 HK3P52790 923 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 CTSCP53634 463 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 HNRNPKP61978 463 aaKnown RBP eCLIP11□□□□□ -0.65
SHMT2-220ENST00000555634 ARHGAP8P85298 464 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms