RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 GABPB1Q06547 395 aaPredicted RBP9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 HSPA14Q0VDF9 509 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 ASPHQ12797 758 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 MTAPQ13126 283 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 STX3Q13277 289 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 OR4D1Q15615 310 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 PLEKHS1Q5SXH7 462 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 KIAA0895LQ68EN5 471 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 CRTC3Q6UUV7 619 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 ZCCHC23Q6ZST2 131 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 FAM47EQ6ZV65 393 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 PIWIL4Q7Z3Z4 852 aaKnown RBP9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 CPLX4Q7Z7G2 160 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 ISCA2Q86U28 154 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 TRAPPC5Q8IUR0 188 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 DENND6BQ8NEG7 585 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 STAG3L4Q8TBR4 150 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 RLN3Q8WXF3 142 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 FOXJ1Q92949 421 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 FUBP1Q96AE4 644 aaKnown RBP9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 PTERQ96BW5 349 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 PDLIM5Q96HC4 596 aaKnown RBP9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 ZNF514Q96K75 400 aaPredicted RBP9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 APOOQ9BUR5 198 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 LGR4Q9BXB1 951 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 GPR174Q9BXC1 333 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 TEX101Q9BY14 249 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 NSRP1Q9H0G5 558 aaKnown RBP9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 EPHX3Q9H6B9 360 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 C6orf106Q9H6K1 298 aaPredicted RBP9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 WSB2Q9NYS7 404 aaPredicted RBP9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 KLHL42Q9P2K6 505 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 MOSPD1Q9UJG1 213 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 OR1A2Q9Y585 309 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 PRUNE2Q8WUY3 3088 aa9.5□□□□□ -0.89
HNRNPC-220ENST00000555585 NUMA1Q14980 2115 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 IGHV1OR15-9A0A0B4J2B8 117 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 SRRM3A6NNA2 597 aaPredicted RBP9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 SYCE1LA8MT33 242 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 SUPT3HB4E1H0 165 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 TARM1B6A8C7 271 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 CACNB4O00305 520 aaPredicted RBP9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 DLX3O60479 287 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 TRIM13O60858 407 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 KERAO60938 352 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 SUPT3HO75486 399 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 TSPAN12O95859 305 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 S100BP04271 92 aaPredicted RBP9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 SERPINE1P05121 402 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 TPBGLP0DKB5 382 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 FGF3P11487 239 aaPredicted RBP9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 MYCLP1P12525 358 aaPredicted RBP9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 ENO3P13929 434 aaPredicted RBP9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 TRIM23P36406 574 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 CCR5P51681 352 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 PRKAA2P54646 552 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 CLDN2P57739 230 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 SIGLEC14Q08ET2 396 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 TERF2Q15554 542 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 TSNQ15631 228 aaKnown RBP9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 PLA2G4EQ3MJ16 856 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 BCL7AQ4VC05 210 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 LIPMQ5VYY2 423 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 RGS9BPQ6ZS82 235 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 FRA10AC1Q70Z53 315 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 RAB44Q7Z6P3 723 aaPredicted RBP9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 LRRTM4Q86VH4 590 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 GPSM1Q86YR5 675 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 TMEM151AQ8N4L1 468 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 CAMKK1Q8N5S9 505 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 FAM160A2Q8N612 972 aaPredicted RBP9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 RHEBL1Q8TAI7 183 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 RAB3IL1Q8TBN0 382 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 SKA2Q8WVK7 121 aaPredicted RBP9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 ASZ1Q8WWH4 475 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 SNX19Q92543 992 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 KIAA1191Q96A73 305 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 TMEM159Q96B96 161 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 CCDC126Q96EE4 140 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 ZNF317Q96PQ6 595 aaPredicted RBP9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 IER2Q9BTL4 223 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 FAM126AQ9BYI3 521 aaPredicted RBP9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 CYP4F12Q9HCS2 524 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 OXSMQ9NWU1 459 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 SIRPGQ9P1W8 387 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 ZNHIT2Q9UHR6 403 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 IKZF3Q9UKT9 509 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 GPR34Q9UPC5 381 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 INVSQ9Y283 1065 aa9.49□□□□□ -0.89
HNRNPC-220ENST00000555585 PABPN1LA6NDY0 278 aaKnown RBP9.48□□□□□ -0.89
HNRNPC-220ENST00000555585 NEMP2A6NFY4 417 aa9.48□□□□□ -0.89
HNRNPC-220ENST00000555585 TMEM202A6NGA9 273 aa9.48□□□□□ -0.89
HNRNPC-220ENST00000555585 A8MT66 165 aa9.48□□□□□ -0.89
HNRNPC-220ENST00000555585 UBXN8O00124 270 aa9.48□□□□□ -0.89
HNRNPC-220ENST00000555585 EIF3FO00303 357 aaPredicted RBP9.48□□□□□ -0.89
HNRNPC-220ENST00000555585 SNX2O60749 519 aa9.48□□□□□ -0.89
HNRNPC-220ENST00000555585 H2AFYO75367 372 aaKnown RBP9.48□□□□□ -0.89
HNRNPC-220ENST00000555585 POP7O75817 140 aaKnown RBP9.48□□□□□ -0.89
HNRNPC-220ENST00000555585 PDGFBP01127 241 aaPredicted RBP9.48□□□□□ -0.89
HNRNPC-220ENST00000555585 MPC1LP0DKB6 136 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms