RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 SLC47A1Q96FL8 570 aa3.14□□□□□ -1.91
SNX6-204ENST00000555541 TBATAQ96M53 351 aa3.14□□□□□ -1.91
SNX6-204ENST00000555541 MCRIP2Q9BUT9 160 aaKnown RBP3.14□□□□□ -1.91
SNX6-204ENST00000555541 PDCL3Q9H2J4 239 aa3.14□□□□□ -1.91
SNX6-204ENST00000555541 PRR34Q9NV39 138 aa3.14□□□□□ -1.91
SNX6-204ENST00000555541 ATAD3AQ9NVI7 634 aa3.14□□□□□ -1.91
SNX6-204ENST00000555541 TRMT1Q9NXH9 659 aaKnown RBP3.14□□□□□ -1.91
SNX6-204ENST00000555541 PTTG2Q9NZH5 202 aa3.14□□□□□ -1.91
SNX6-204ENST00000555541 KCNE2Q9Y6J6 123 aa3.14□□□□□ -1.91
SNX6-204ENST00000555541 STK36Q9NRP7 1315 aa3.14□□□□□ -1.91
SNX6-204ENST00000555541 PLOD2O00469 737 aa3.13□□□□□ -1.91
SNX6-204ENST00000555541 ZBTB43O43298 467 aa3.13□□□□□ -1.91
SNX6-204ENST00000555541 GPR137BO60478 399 aa3.13□□□□□ -1.91
SNX6-204ENST00000555541 GCNT3O95395 438 aa3.13□□□□□ -1.91
SNX6-204ENST00000555541 ATP1A3P13637 1013 aa3.13□□□□□ -1.91
SNX6-204ENST00000555541 EPHA2P29317 976 aa3.13□□□□□ -1.91
SNX6-204ENST00000555541 PIK3CAP42336 1068 aa3.13□□□□□ -1.91
SNX6-204ENST00000555541 CCR9P51686 369 aa3.13□□□□□ -1.91
SNX6-204ENST00000555541 BMXP51813 675 aa3.13□□□□□ -1.91
SNX6-204ENST00000555541 PPARDQ03181 441 aa3.13□□□□□ -1.91
SNX6-204ENST00000555541 LRMPQ12912 555 aa3.13□□□□□ -1.91
SNX6-204ENST00000555541 MFAP5Q13361 173 aa3.13□□□□□ -1.91
SNX6-204ENST00000555541 TBCEQ15813 527 aaPredicted RBP3.13□□□□□ -1.91
SNX6-204ENST00000555541 FFAR4Q5NUL3 377 aa3.13□□□□□ -1.91
SNX6-204ENST00000555541 TPRG1Q6ZUI0 275 aa3.13□□□□□ -1.91
SNX6-204ENST00000555541 ZNF534Q76KX8 674 aa3.13□□□□□ -1.91
SNX6-204ENST00000555541 PLD3Q8IV08 490 aa3.13□□□□□ -1.91
SNX6-204ENST00000555541 CEP97Q8IW35 865 aa3.13□□□□□ -1.91
SNX6-204ENST00000555541 SCML4Q8N228 414 aa3.13□□□□□ -1.91
SNX6-204ENST00000555541 KCNG4Q8TDN1 519 aa3.13□□□□□ -1.91
SNX6-204ENST00000555541 GMPPAQ96IJ6 420 aaPredicted RBP3.13□□□□□ -1.91
SNX6-204ENST00000555541 C18orf12Q96KH6 178 aa3.13□□□□□ -1.91
SNX6-204ENST00000555541 IWS1Q96ST2 819 aa3.13□□□□□ -1.91
SNX6-204ENST00000555541 RHNO1Q9BSD3 238 aa3.13□□□□□ -1.91
SNX6-204ENST00000555541 SEMA6AQ9H2E6 1030 aa3.13□□□□□ -1.91
SNX6-204ENST00000555541 PGAP2Q9UHJ9 254 aa3.13□□□□□ -1.91
SNX6-204ENST00000555541 ZNF318Q5VUA4 2279 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 TMEM8BA6NDV4 472 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 TMEM189-UBE2V1I3L0A0 370 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 J3QR06 171 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 SCAMP1O15126 338 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 OGG1O15527 345 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 TMCC2O75069 709 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 CSPG5O95196 566 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 CCNDBP1O95273 360 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 EML2O95834 649 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 HIST1H2ABP04908 130 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 FAM157CP0CG43 387 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 HIST1H2ADP20671 130 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 TLX1P31314 330 aaPredicted RBP3.12□□□□□ -1.91
SNX6-204ENST00000555541 MSH2P43246 934 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 GPR143P51810 404 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 THOP1P52888 689 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 GALCP54803 685 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 RPS3AP61247 264 aaKnown RBP3.12□□□□□ -1.91
SNX6-204ENST00000555541 UBE2V1Q13404 147 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 XKR6Q5GH73 641 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 HIST3H2AQ7L7L0 130 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 ISCA2Q86U28 154 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 HJURPQ8NCD3 748 aaPredicted RBP3.12□□□□□ -1.91
SNX6-204ENST00000555541 PPHLN1Q8NEY8 458 aaKnown RBP3.12□□□□□ -1.91
SNX6-204ENST00000555541 IL17REQ8NFR9 667 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 OR2T6Q8NHC8 308 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 GSDMBQ8TAX9 411 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 GRHL3Q8TE85 626 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 RFFLQ8WZ73 363 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 C1orf74Q96LT6 269 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 PKP2Q99959 881 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 RRP7BPQ9NSQ0 103 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 ECHDC1Q9NTX5 307 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 COQ3Q9NZJ6 369 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 TSPYL4Q9UJ04 414 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 DBNLQ9UJU6 430 aaKnown RBP3.12□□□□□ -1.91
SNX6-204ENST00000555541 EXOGQ9Y2C4 368 aaKnown RBP3.12□□□□□ -1.91
SNX6-204ENST00000555541 TMEM98Q9Y2Y6 226 aa3.12□□□□□ -1.91
SNX6-204ENST00000555541 PLK4O00444 970 aa3.11□□□□□ -1.91
SNX6-204ENST00000555541 EIF3JO75822 258 aaKnown RBP3.11□□□□□ -1.91
SNX6-204ENST00000555541 TMEM63AO94886 807 aa3.11□□□□□ -1.91
SNX6-204ENST00000555541 MOCS3O95396 460 aa3.11□□□□□ -1.91
SNX6-204ENST00000555541 EIF2S1P05198 315 aaKnown RBP3.11□□□□□ -1.91
SNX6-204ENST00000555541 ANXA7P20073 488 aaKnown RBP3.11□□□□□ -1.91
SNX6-204ENST00000555541 CBLP22681 906 aa3.11□□□□□ -1.91
SNX6-204ENST00000555541 SHC1P29353 583 aa3.11□□□□□ -1.91
SNX6-204ENST00000555541 WNT5AP41221 380 aa3.11□□□□□ -1.91
SNX6-204ENST00000555541 GAGE2BQ13066 116 aa3.11□□□□□ -1.91
SNX6-204ENST00000555541 ENPP2Q13822 863 aa3.11□□□□□ -1.91
SNX6-204ENST00000555541 TSTQ16762 297 aaKnown RBP3.11□□□□□ -1.91
SNX6-204ENST00000555541 PCGF3Q3KNV8 242 aa3.11□□□□□ -1.91
SNX6-204ENST00000555541 GAGE2EQ4V326 116 aa3.11□□□□□ -1.91
SNX6-204ENST00000555541 ZDHHC20Q5W0Z9 365 aa3.11□□□□□ -1.91
SNX6-204ENST00000555541 ALS2CLQ60I27 953 aa3.11□□□□□ -1.91
SNX6-204ENST00000555541 ACSM2BQ68CK6 577 aa3.11□□□□□ -1.91
SNX6-204ENST00000555541 FAM109BQ6ICB4 259 aaPredicted RBP3.11□□□□□ -1.91
SNX6-204ENST00000555541 GAGE2AQ6NT46 116 aa3.11□□□□□ -1.91
SNX6-204ENST00000555541 NCEH1Q6PIU2 408 aa3.11□□□□□ -1.91
SNX6-204ENST00000555541 FASTKD5Q7L8L6 764 aaKnown RBP3.11□□□□□ -1.91
SNX6-204ENST00000555541 GALNT13Q8IUC8 556 aa3.11□□□□□ -1.91
SNX6-204ENST00000555541 GPALPP1Q8IXQ4 340 aa3.11□□□□□ -1.91
SNX6-204ENST00000555541 L3MBTL4Q8NA19 623 aa3.11□□□□□ -1.91
SNX6-204ENST00000555541 SEMA4DQ92854 862 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms