RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 ZSCAN5DPP0CG00 497 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 DEFA5Q01523 94 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 BDH1Q02338 343 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 CRTC2Q53ET0 693 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF782Q6ZMW2 699 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-216ENST00000555002 CYP2W1Q8TAV3 490 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 RCN3Q96D15 328 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 COPS8Q99627 209 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 TTPALQ9BTX7 342 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 TMEM121BQ9BXQ6 578 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-216ENST00000555002 KIAA1522Q9P206 1035 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF221Q9UK13 617 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 NPIPA1Q9UND3 350 aa6.82□□□□□ -1.32
SYNE2-216ENST00000555002 CHADO15335 359 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 PDYNP01213 254 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 NCBP2P52298 156 aaKnown RBP eCLIP6.81□□□□□ -1.32
SYNE2-216ENST00000555002 RBM44Q6ZP01 1051 aaKnown RBP6.81□□□□□ -1.32
SYNE2-216ENST00000555002 TCF12Q99081 682 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 EML1O00423 815 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 BRINP1O60477 761 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 PSEN1P49768 467 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 CSTF1Q05048 431 aaKnown RBP6.81□□□□□ -1.32
SYNE2-216ENST00000555002 GMCL1P1Q8NEA9 526 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 FBXO22Q8NEZ5 403 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF606Q8WXB4 792 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 CDT1Q9H211 546 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 MRM3Q9HC36 420 aaKnown RBP6.81□□□□□ -1.32
SYNE2-216ENST00000555002 ERVK-5Q9HDB9 667 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 DEC1Q9P2X7 70 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 A0A1W2PQH9 124 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 AP5Z1O43299 807 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 FGF19O95750 216 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 NAGLUP54802 743 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 TMEM164Q5U3C3 297 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 CROCCP3Q8IVE0 287 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 DLG3Q92796 817 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 BCAS3Q9H6U6 928 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 TCF7L1Q9HCS4 588 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 CUEDC1Q9NWM3 386 aaPredicted RBP6.81□□□□□ -1.32
SYNE2-216ENST00000555002 A8MUI8 341 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 SLC30A4O14863 429 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 AGXTP21549 392 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 PPIBP23284 216 aaKnown RBP6.81□□□□□ -1.32
SYNE2-216ENST00000555002 GLUD2P49448 558 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 HERV-K104P61576 105 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 LRRC46Q96FV0 321 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 ALG2Q9H553 416 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 CAPN6Q9Y6Q1 641 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 A0A0G2JPF8 293 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 CARNS1A5YM72 827 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 TRIM64CA6NLI5 447 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 HNRNPCL3B7ZW38 293 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 PCDHGA12O60330 932 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 NME6O75414 186 aaPredicted RBP6.81□□□□□ -1.32
SYNE2-216ENST00000555002 HNRNPCL4P0DMR1 293 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 ENTPD1P49961 510 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 EIPR1Q53HC9 387 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 GTF2IRD2BQ6EKJ0 949 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 SV2AQ7L0J3 742 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 GTF2IRD2Q86UP8 949 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 ALYREFQ86V81 257 aaKnown RBP6.81□□□□□ -1.32
SYNE2-216ENST00000555002 OR5T1Q8NG75 326 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 POC1BQ8TC44 478 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 POLLQ9UGP5 575 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 GPR75-ASB3A0A0A6YYF3 556 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 A6NCN8 305 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 PEX12O00623 359 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 PIAS1O75925 651 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 NFATC1O95644 943 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 CPNE6O95741 557 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 POU2F1P14859 743 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 IDO1P14902 403 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 RPS9P46781 194 aaKnown RBP6.81□□□□□ -1.32
SYNE2-216ENST00000555002 HCAR3P49019 387 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 TYSND1Q2T9J0 566 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 RFTN2Q52LD8 501 aaPredicted RBP6.81□□□□□ -1.32
SYNE2-216ENST00000555002 SLITRK4Q8IW52 837 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 CD300LFQ8TDQ1 290 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 RIT1Q92963 219 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 ERGIC2Q96RQ1 377 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 FBXL3Q9UKT7 428 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 PNPLA6Q8IY17 1366 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 GLI1P08151 1106 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 GSTT2BP0CG30 244 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 RARAP10276 462 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 PRLRP16471 622 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 ARCN1P48444 511 aaKnown RBP6.81□□□□□ -1.32
SYNE2-216ENST00000555002 SELENOVP59797 346 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 ECH1Q13011 328 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 TTC27Q6P3X3 843 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 MOXD1Q6UVY6 613 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 OR5T2Q8NGG2 359 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 LRRC20Q8TCA0 184 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 KCNK4Q9NYG8 393 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 EIF3KQ9UBQ5 218 aaKnown RBP6.81□□□□□ -1.32
SYNE2-216ENST00000555002 FARSAQ9Y285 508 aaKnown RBP6.81□□□□□ -1.32
SYNE2-216ENST00000555002 CLTCQ00610 1675 aaKnown RBP6.81□□□□□ -1.32
SYNE2-216ENST00000555002 C9IYK1 514 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 J3QRK9 145 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 M0R129 80 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms