RNA–Protein interactions for RNA: ENST00000554986.2

SIX1-203, Transcript of SIX homeobox 1, humanhuman

TSL 3 BASIC

Gene SIX1, Length 1,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-203ENST00000554986 ZNF567Q8N184 647 aa13.18□□□□□ -0.3
SIX1-203ENST00000554986 ACVR1CQ8NER5 493 aa13.18□□□□□ -0.3
SIX1-203ENST00000554986 BPIFB6Q8NFQ5 453 aa13.18□□□□□ -0.3
SIX1-203ENST00000554986 OSCP1Q8WVF1 389 aa13.18□□□□□ -0.3
SIX1-203ENST00000554986 KCTD4Q8WVF5 259 aa13.18□□□□□ -0.3
SIX1-203ENST00000554986 EDEM1Q92611 657 aa13.18□□□□□ -0.3
SIX1-203ENST00000554986 MRPS31Q92665 395 aaKnown RBP13.18□□□□□ -0.3
SIX1-203ENST00000554986 MUL1Q969V5 352 aa13.18□□□□□ -0.3
SIX1-203ENST00000554986 RDH12Q96NR8 316 aa13.18□□□□□ -0.3
SIX1-203ENST00000554986 LGMNQ99538 433 aa13.18□□□□□ -0.3
SIX1-203ENST00000554986 SLC46A2Q9BY10 475 aa13.18□□□□□ -0.3
SIX1-203ENST00000554986 RNF38Q9H0F5 515 aa13.18□□□□□ -0.3
SIX1-203ENST00000554986 ATP13A3Q9H7F0 1226 aa13.18□□□□□ -0.3
SIX1-203ENST00000554986 SACM1LQ9NTJ5 587 aa13.18□□□□□ -0.3
SIX1-203ENST00000554986 PIH1D1Q9NWS0 290 aaKnown RBP13.18□□□□□ -0.3
SIX1-203ENST00000554986 ACOT9Q9Y305 439 aa13.18□□□□□ -0.3
SIX1-203ENST00000554986 MYO18AQ92614 2054 aaKnown RBP13.17□□□□□ -0.3
SIX1-203ENST00000554986 ISPDA4D126 451 aa13.17□□□□□ -0.3
SIX1-203ENST00000554986 CENPBD1B2RD01 187 aa13.17□□□□□ -0.3
SIX1-203ENST00000554986 SYNCRIPO60506 623 aaKnown RBP13.17□□□□□ -0.3
SIX1-203ENST00000554986 GMNNO75496 209 aa13.17□□□□□ -0.3
SIX1-203ENST00000554986 ALBP02768 609 aa13.17□□□□□ -0.3
SIX1-203ENST00000554986 ITIH1P19827 911 aa13.17□□□□□ -0.3
SIX1-203ENST00000554986 CRHBPP24387 322 aa13.17□□□□□ -0.3
SIX1-203ENST00000554986 ARL4AP40617 200 aa13.17□□□□□ -0.3
SIX1-203ENST00000554986 PPP3CCP48454 512 aa13.17□□□□□ -0.3
SIX1-203ENST00000554986 RAD23AP54725 363 aa13.17□□□□□ -0.3
SIX1-203ENST00000554986 AQP6Q13520 282 aa13.17□□□□□ -0.3
SIX1-203ENST00000554986 USP10Q14694 798 aaKnown RBP13.17□□□□□ -0.3
SIX1-203ENST00000554986 SPCS2Q15005 226 aa13.17□□□□□ -0.3
SIX1-203ENST00000554986 SMAD2Q15796 467 aaKnown RBP13.17□□□□□ -0.3
SIX1-203ENST00000554986 INAVAQ3KP66 663 aa13.17□□□□□ -0.3
SIX1-203ENST00000554986 C6orf183Q5T699 404 aa13.17□□□□□ -0.3
SIX1-203ENST00000554986 CNSTQ6PJW8 725 aa13.17□□□□□ -0.3
SIX1-203ENST00000554986 CRTC3Q6UUV7 619 aa13.17□□□□□ -0.3
SIX1-203ENST00000554986 SPARTQ8N0X7 666 aa13.17□□□□□ -0.3
SIX1-203ENST00000554986 ST13P5Q8NFI4 369 aaPredicted RBP13.17□□□□□ -0.3
SIX1-203ENST00000554986 OR52K1Q8NGK4 314 aa13.17□□□□□ -0.3
SIX1-203ENST00000554986 FAM149B1Q96BN6 582 aa13.17□□□□□ -0.3
SIX1-203ENST00000554986 HOXD1Q9GZZ0 328 aa13.17□□□□□ -0.3
SIX1-203ENST00000554986 HPS4Q9NQG7 708 aa13.17□□□□□ -0.3
SIX1-203ENST00000554986 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.17□□□□□ -0.3
SIX1-203ENST00000554986 NAALAD2Q9Y3Q0 740 aa13.17□□□□□ -0.3
SIX1-203ENST00000554986 NUP210Q8TEM1 1887 aaPredicted RBP13.17□□□□□ -0.3
SIX1-203ENST00000554986 TCRBV5S2A0A599 114 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 ANKRD34BA5PLL1 514 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 FAM149AA5PLN7 773 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 M0QX08 132 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 ARPC2O15144 300 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 COCHO43405 550 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 TLR5O60602 858 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 KCNH1O95259 989 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 LDLRP01130 860 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 HDCP19113 662 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 ETFBP38117 255 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 IFITM3Q01628 133 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 SF3B4Q15427 424 aaKnown RBP eCLIP13.16□□□□□ -0.3
SIX1-203ENST00000554986 AASDHQ4L235 1098 aaPredicted RBP13.16□□□□□ -0.3
SIX1-203ENST00000554986 PERM1Q5SV97 790 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 SYPL2Q5VXT5 272 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 BTBD8Q5XKL5 378 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 KCTD11Q693B1 232 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 BTLAQ7Z6A9 289 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 SPPL2CQ8IUH8 684 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 FUNDC1Q8IVP5 155 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 CNTN4Q8IWV2 1026 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 CCNYL1Q8N7R7 359 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 ARL10Q8N8L6 244 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 ARL14EPQ8N8R7 260 aaPredicted RBP13.16□□□□□ -0.3
SIX1-203ENST00000554986 FUNDC2Q9BWH2 189 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 NDEL1Q9GZM8 345 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 SMG9Q9H0W8 520 aaKnown RBP13.16□□□□□ -0.3
SIX1-203ENST00000554986 OSBPL2Q9H1P3 480 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 GTSE1Q9NYZ3 720 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 POU2F3Q9UKI9 436 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 ST14Q9Y5Y6 855 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 HELZP42694 1942 aaKnown RBP13.16□□□□□ -0.3
SIX1-203ENST00000554986 A0A087X1B8 175 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 H0Y858 1186 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 MFSD11O43934 449 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 SNAP29O95721 258 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 OLFM2O95897 454 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 GPX3P22352 226 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 EEF1B2P24534 225 aaKnown RBP13.16□□□□□ -0.3
SIX1-203ENST00000554986 TPTEP56180 551 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 RAB10P61026 200 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 STX1BP61266 288 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 IFITM2Q01629 132 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 ILF2Q12905 390 aaKnown RBP13.16□□□□□ -0.3
SIX1-203ENST00000554986 TOP3AQ13472 1001 aaPredicted RBP13.16□□□□□ -0.3
SIX1-203ENST00000554986 PAFAH1B3Q15102 231 aaKnown RBP13.16□□□□□ -0.3
SIX1-203ENST00000554986 CTF1Q16619 201 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 TIGD2Q4W5G0 525 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 ARHGAP15Q53QZ3 475 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 HECTD3Q5T447 861 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 LARP4Q71RC2 724 aaKnown RBP eCLIP13.16□□□□□ -0.3
SIX1-203ENST00000554986 THAP5Q7Z6K1 395 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 RETREG3Q86VR2 466 aa13.16□□□□□ -0.3
SIX1-203ENST00000554986 TXNDC5Q8NBS9 432 aaKnown RBP13.16□□□□□ -0.3
SIX1-203ENST00000554986 LILRB4Q8NHJ6 448 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms