RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 ZNF669Q96BR6 464 aaPredicted RBP12.11□□□□□ -0.47
SYNE2-214ENST00000554928 LINC00615Q96LM1 132 aaPredicted RBP12.11□□□□□ -0.47
SYNE2-214ENST00000554928 RMDN2Q96LZ7 410 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 INSM2Q96T92 566 aaPredicted RBP12.11□□□□□ -0.47
SYNE2-214ENST00000554928 SEMA6CQ9H3T2 930 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 COG4Q9H9E3 785 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 XAB2Q9HCS7 855 aaKnown RBP12.11□□□□□ -0.47
SYNE2-214ENST00000554928 SARS2Q9NP81 518 aaKnown RBP12.11□□□□□ -0.47
SYNE2-214ENST00000554928 CATSPERZQ9NTU4 200 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 FREM2Q5SZK8 3169 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 SDR42E2A6NKP2 422 aa12.1□□□□□ -0.47
SYNE2-214ENST00000554928 CFAP99D6REC4 459 aa12.1□□□□□ -0.47
SYNE2-214ENST00000554928 URI1O94763 535 aaPredicted RBP12.1□□□□□ -0.47
SYNE2-214ENST00000554928 SEC31AO94979 1220 aaKnown RBP12.1□□□□□ -0.47
SYNE2-214ENST00000554928 RALBP11234 206 aa12.1□□□□□ -0.47
SYNE2-214ENST00000554928 XRCC1P18887 633 aaPredicted RBP12.1□□□□□ -0.47
SYNE2-214ENST00000554928 SARNPP82979 210 aaKnown RBP12.1□□□□□ -0.47
SYNE2-214ENST00000554928 LAMB3Q13751 1172 aa12.1□□□□□ -0.47
SYNE2-214ENST00000554928 BRD3Q15059 726 aa12.1□□□□□ -0.47
SYNE2-214ENST00000554928 TRADDQ15628 312 aa12.1□□□□□ -0.47
SYNE2-214ENST00000554928 ZNF789Q5FWF6 425 aa12.1□□□□□ -0.47
SYNE2-214ENST00000554928 KIAA0930Q6ICG6 404 aaPredicted RBP12.1□□□□□ -0.47
SYNE2-214ENST00000554928 WASH2PQ6VEQ5 465 aa12.1□□□□□ -0.47
SYNE2-214ENST00000554928 PACS1Q6VY07 963 aa12.1□□□□□ -0.47
SYNE2-214ENST00000554928 SYDE1Q6ZW31 735 aaPredicted RBP12.1□□□□□ -0.47
SYNE2-214ENST00000554928 SLITRK4Q8IW52 837 aa12.1□□□□□ -0.47
SYNE2-214ENST00000554928 KRT222Q8N1A0 295 aa12.1□□□□□ -0.47
SYNE2-214ENST00000554928 ZNF592Q92610 1267 aa12.1□□□□□ -0.47
SYNE2-214ENST00000554928 PEX13Q92968 403 aa12.1□□□□□ -0.47
SYNE2-214ENST00000554928 SGSM3Q96HU1 749 aa12.1□□□□□ -0.47
SYNE2-214ENST00000554928 ZNF514Q96K75 400 aaPredicted RBP12.1□□□□□ -0.47
SYNE2-214ENST00000554928 DEPDC7Q96QD5 511 aa12.1□□□□□ -0.47
SYNE2-214ENST00000554928 GFM1Q96RP9 751 aaKnown RBP12.1□□□□□ -0.47
SYNE2-214ENST00000554928 CCM2Q9BSQ5 444 aa12.1□□□□□ -0.47
SYNE2-214ENST00000554928 DPH5Q9H2P9 285 aa12.1□□□□□ -0.47
SYNE2-214ENST00000554928 WASH6PQ9NQA3 447 aa12.1□□□□□ -0.47
SYNE2-214ENST00000554928 KCNK4Q9NYG8 393 aa12.1□□□□□ -0.47
SYNE2-214ENST00000554928 OGFRQ9NZT2 677 aa12.1□□□□□ -0.47
SYNE2-214ENST00000554928 MAD1L1Q9Y6D9 718 aa12.1□□□□□ -0.47
SYNE2-214ENST00000554928 DNMT3AQ9Y6K1 912 aaPredicted RBP12.1□□□□□ -0.47
SYNE2-214ENST00000554928 KIR2DS5A0A0G2JLQ3 304 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 A0A0G2JNG1 304 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 FAM237BA0A1B0GVD1 139 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 EFCAB8A8MWE9 144 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 KIR2DS3K7RE56 304 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 AP3B1O00203 1094 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 TAF4O00268 1085 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 TCEA3O75764 348 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 AP2A2O94973 939 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 VIPP01282 170 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 MPOP05164 745 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 HGFP14210 728 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 VCLP18206 1134 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 NSG1P42857 185 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 MAPK9P45984 424 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 CSE1LP55060 971 aaKnown RBP12.09□□□□□ -0.47
SYNE2-214ENST00000554928 ZFP36L1Q07352 338 aaKnown RBP12.09□□□□□ -0.47
SYNE2-214ENST00000554928 CYP4F3Q08477 520 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 BIRC2Q13490 618 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 DHX34Q14147 1143 aaKnown RBP12.09□□□□□ -0.47
SYNE2-214ENST00000554928 GPR18Q14330 331 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 KIR2DS5Q14953 304 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 BBS9Q3SYG4 887 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 CTSL3PQ5NE16 218 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 CAPRIN2Q6IMN6 1127 aaKnown RBP12.09□□□□□ -0.47
SYNE2-214ENST00000554928 TMEM26Q6ZUK4 368 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 CENPUQ71F23 418 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 ZNF572Q7Z3I7 529 aaPredicted RBP12.09□□□□□ -0.47
SYNE2-214ENST00000554928 TMEM135Q86UB9 458 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 SLC9B2Q86UD5 537 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 HOOK3Q86VS8 718 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 CACTIN-AS1Q8N1I8 211 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 HM13Q8TCT9 377 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 HEXDCQ8WVB3 486 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 STAMBPL1Q96FJ0 436 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 PRR11Q96HE9 360 aaPredicted RBP12.09□□□□□ -0.47
SYNE2-214ENST00000554928 RUNDC3BQ96NL0 473 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 SLC38A3Q99624 504 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 P2RY12Q9H244 342 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 OR52A5Q9H2C5 316 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 IMP3Q9NV31 184 aaKnown RBP12.09□□□□□ -0.47
SYNE2-214ENST00000554928 SLC17A6Q9P2U8 582 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 CDC23Q9UJX2 597 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 RPS6KL1Q9Y6S9 549 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 IGF2RP11717 2491 aa12.09□□□□□ -0.47
SYNE2-214ENST00000554928 TPRP12270 2363 aaKnown RBP12.08□□□□□ -0.47
SYNE2-214ENST00000554928 ACACBO00763 2458 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 OR5K4A6NMS3 321 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 KCNJ13O60928 360 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 MTHFD1P11586 935 aaKnown RBP12.08□□□□□ -0.48
SYNE2-214ENST00000554928 TYRP1P17643 537 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 CCR7P32248 378 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 GPR3P46089 330 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 GFERP55789 205 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 PPP1CAP62136 330 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 C16orf72Q14CZ0 275 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 FASTKD3Q14CZ7 662 aaKnown RBP12.08□□□□□ -0.48
SYNE2-214ENST00000554928 MORF4L2Q15014 288 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 TYSND1Q2T9J0 566 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 MAP9Q49MG5 647 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms