RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 ZNF18P17022 549 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 HNRNPA2B1P22626 353 aaKnown RBP4.93□□□□□ -1.62
ATXN3-228ENST00000554592 UGT1A5P35504 534 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 PIK3CAP42336 1068 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 NUCB2P80303 420 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 CLCA4Q14CN2 919 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 SLC39A14Q15043 492 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 ZNF284Q2VY69 593 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 ACCSLQ4AC99 568 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 DCAF6Q58WW2 860 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 DCAF17Q5H9S7 520 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-228ENST00000554592 MS4A13Q5J8X5 152 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 C10orf62Q5T681 223 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-228ENST00000554592 NADSYN1Q6IA69 706 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 MSANTD2Q6P1R3 559 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 GUSBP11Q6P575 273 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 MMS22LQ6ZRQ5 1243 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 UNC13DQ70J99 1090 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 RAB11FIP2Q7L804 512 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 BHLHA9Q7RTU4 235 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 FAM186BQ8IYM0 893 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 APCDD1Q8J025 514 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 SIX6OS1Q8N1H7 587 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 CFAP52Q8N1V2 620 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 SCML4Q8N228 414 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 AMER2Q8N7J2 671 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 PDILTQ8N807 584 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 IQUBQ8NA54 791 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 OR52N2Q8NGI0 321 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 ZFP28Q8NHY6 868 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 BMFQ96LC9 184 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 CCDC138Q96M89 665 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 STRADBQ9C0K7 418 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 MMRN2Q9H8L6 949 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 CNGB3Q9NQW8 809 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-228ENST00000554592 PARPBPQ9NWS1 579 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 ANAPC2Q9UJX6 822 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 SARDHQ9UL12 918 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 SMC3Q9UQE7 1217 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 MED16Q9Y2X0 877 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 SNX13Q9Y5W8 968 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 MORC2Q9Y6X9 1032 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-228ENST00000554592 AHCTF1Q8WYP5 2266 aa4.93□□□□□ -1.62
ATXN3-228ENST00000554592 USP9XQ93008 2570 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-228ENST00000554592 SPTY2D1-AS1A0A0U1RR47 76 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 PVALEFA0A1B0GWK0 134 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 CDHR4A6H8M9 788 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 DRGXA6NNA5 263 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 F8W8V4 182 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 TULP2O00295 520 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 NTN3O00634 580 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-228ENST00000554592 MAPK13O15264 365 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 IPO13O94829 963 aaKnown RBP4.92□□□□□ -1.62
ATXN3-228ENST00000554592 PRSS23O95084 383 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 NR4A1P22736 598 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 CD82P27701 267 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 RABIFP47224 123 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 GCLMP48507 274 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 STK19P49842 368 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-228ENST00000554592 VAMP7P51809 220 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 PDX1P52945 283 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 PLK1P53350 603 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 METAP1P53582 386 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 RAD23BP54727 409 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 CLDN2P57739 230 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 TAS2R38P59533 333 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 CEBPZQ03701 1054 aaKnown RBP4.92□□□□□ -1.62
ATXN3-228ENST00000554592 ABHD18Q0P651 414 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 ADIGQ0VDE8 80 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 SRSF6Q13247 344 aaKnown RBP4.92□□□□□ -1.62
ATXN3-228ENST00000554592 FZD2Q14332 565 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 NUMA1Q14980 2115 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 DLG2Q15700 870 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 DEFB133Q30KQ1 61 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 RABL3Q5HYI8 236 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 C1orf220Q5T0J3 134 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 PIP5KL1Q5T9C9 394 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 DRICH1Q6PGQ1 229 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-228ENST00000554592 CRTC1Q6UUV9 634 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 GCNT7Q6ZNI0 430 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 Q6ZPA2 131 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 USP51Q70EK9 711 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 PARGQ86W56 976 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 SLC22A18ASQ8N1D0 253 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 SLC4A11Q8NBS3 891 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 ZNF548Q8NEK5 533 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-228ENST00000554592 TMIEQ8NEW7 156 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 SPATA20Q8TB22 786 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 LMX1AQ8TE12 382 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 TAS1R2Q8TE23 839 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 IRGQQ8WZA9 623 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 KLK6Q92876 244 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 TMEM159Q96B96 161 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 FEM1CQ96JP0 617 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 SGCZQ96LD1 299 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 ARPC5LQ9BPX5 153 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 CCDC3Q9BQI4 270 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 FUCA2Q9BTY2 467 aa4.92□□□□□ -1.62
ATXN3-228ENST00000554592 B3GNT4Q9C0J1 378 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms