RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 DKKL1Q9UK85 242 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 KCTD3Q9Y597 815 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 SELENOKQ9Y6D0 94 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 A0A087X0B3 334 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 FAM187AA6NFU0 413 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 CDH16O75309 829 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 IPO13O94829 963 aaKnown RBP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ZBTB48P10074 688 aaPredicted RBP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ZMYND11Q15326 602 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 TIPARPQ7Z3E1 657 aaKnown RBP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 FNDC5Q8NAU1 212 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 METTL6Q8TCB7 284 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 FAM151AQ8WW52 585 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 FAM210AQ96ND0 272 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 TMEM79Q9BSE2 394 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ADGRE3Q9BY15 652 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 C12orf4Q9NQ89 552 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 KCNH7Q9NS40 1196 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF20P17024 532 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 PTPN3P26045 913 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 AXLP30530 894 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 VHLP40337 213 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 GABRA2P47869 451 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 CCNI2Q6ZMN8 369 aaPredicted RBP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 TC2NQ8N9U0 490 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 CENPIQ92674 756 aaPredicted RBP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ALPK1Q96QP1 1244 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 IL25Q9H293 177 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 RMND5AQ9H871 391 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ADAP2Q9NPF8 381 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 CEP72Q9P209 647 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 RHCGQ9UBD6 479 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ATP10AO60312 1499 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF726A6NNF4 738 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 CES2O00748 559 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 PAPSS1O43252 624 aaPredicted RBP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 CPN2P22792 545 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 AQP5P55064 265 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 GXYLT1Q4G148 440 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 XKR4Q5GH76 650 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 IQCHQ86VS3 1027 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 C12orf56Q8IXR9 622 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 C3orf20Q8ND61 904 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 APOLD1Q96LR9 279 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 MTG1Q9BT17 334 aaPredicted RBP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ABI3Q9P2A4 366 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 PISDQ9UG56 409 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ABCC2Q92887 1545 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 CDC14CA4D256 554 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 CASKO14936 926 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 HBP1O60381 514 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 MICAL2O94851 1124 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 CEBPDP49716 269 aaPredicted RBP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 POU4F3Q15319 338 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ATAD3CQ5T2N8 411 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 OR6K6Q8NGW6 343 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 OR52J3Q8NH60 311 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 MCFD2Q8NI22 146 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 METTL7AQ9H8H3 244 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 OSGEPQ9NPF4 335 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 A1CFQ9NQ94 594 aaKnown RBP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 TBC1D30Q9Y2I9 924 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ADAMTS3O15072 1205 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 DUSP4Q13115 394 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ALG11Q2TAA5 492 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 PLEKHS1Q5SXH7 462 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 STEAP3Q658P3 488 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF470Q6ECI4 717 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 TMEM110Q86TL2 294 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 FAM217AQ8IXS0 508 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 LINC00301Q8NCQ3 95 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 NSMAFQ92636 917 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 NSUN4Q96CB9 384 aaKnown RBP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 MAFBQ9Y5Q3 323 aaPredicted RBP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 TRPV2Q9Y5S1 764 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 F8VZ95 297 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 UNC5CO95185 931 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF823P16415 610 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 FMO3P31513 532 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 DSC2Q02487 901 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 DYRK1AQ13627 763 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 HES1Q14469 280 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 PDK1Q15118 436 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 CNEP1R1Q8N9A8 125 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 BADQ92934 168 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 SEMA3CQ99985 751 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 SYT17Q9BSW7 474 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 IFT46Q9NQC8 304 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 DERAQ9Y315 318 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 CCDC188H7C350 402 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 NADKO95544 446 aaPredicted RBP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 COPAP53621 1224 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 TTLL9Q3SXZ7 439 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 RGMBQ6NW40 437 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 UNC13DQ70J99 1090 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 HIPK2Q9H2X6 1198 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 CDH20Q9HBT6 801 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 DDX20Q9UHI6 824 aaKnown RBP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ZDHHC8Q9ULC8 765 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms