RNA–Protein interactions for RNA: ENST00000554546.5

NUMB-212, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-212ENST00000554546 TBCDQ9BTW9 1192 aa11.17□□□□□ -0.62
NUMB-212ENST00000554546 NIFKQ9BYG3 293 aaKnown RBP11.17□□□□□ -0.62
NUMB-212ENST00000554546 RNF121Q9H920 327 aa11.17□□□□□ -0.62
NUMB-212ENST00000554546 ABCG2Q9UNQ0 655 aa11.17□□□□□ -0.62
NUMB-212ENST00000554546 RPS10-NUDT3A0A1W2PQS6 291 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 FAM159BA6NKW6 160 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 TMEM233B4DJY2 109 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 B4DXG7 233 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 E9PAM4 449 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 ARPC2O15144 300 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 CNTN5O94779 1100 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 LCKP06239 509 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 FGRP09769 529 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 ZP3P21754 424 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 CD6P30203 668 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 CA5AP35218 305 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 MASP1P48740 699 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 CLCN7P51798 805 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 VAMP7P51809 220 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 IL5RAQ01344 420 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 BAK1Q16611 211 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 SWI5Q1ZZU3 235 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 CES3Q6UWW8 571 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 ZDHHC13Q8IUH4 622 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 OR9I1Q8NGQ6 314 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 STON2Q8WXE9 905 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 Q96MT0 163 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 SLC4A9Q96Q91 983 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 SLC30A2Q9BRI3 323 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 FAM49BQ9NUQ9 324 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 USE1Q9NZ43 259 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 HES2Q9Y543 173 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 DUOX1Q9NRD9 1551 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 A0A1W2PQ09 198 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 ERN1O75460 977 aaKnown RBP11.16□□□□□ -0.62
NUMB-212ENST00000554546 RFPL3O75679 317 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 NDUFB10O96000 172 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 HOXC5Q00444 222 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 ZC3H12BQ5HYM0 836 aaKnown RBP11.16□□□□□ -0.62
NUMB-212ENST00000554546 GPRIN3Q6ZVF9 776 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 SYVN1Q86TM6 617 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 PLD6Q8N2A8 252 aaKnown RBP11.16□□□□□ -0.62
NUMB-212ENST00000554546 VWA5B2Q8N398 1253 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 BLOC1S5Q8TDH9 187 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 TMC2Q8TDI7 906 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 NELL1Q92832 810 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 SEMA4DQ92854 862 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 COPS5Q92905 334 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 MYDGFQ969H8 173 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 ARL5BQ96KC2 179 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 QKIQ96PU8 341 aaKnown RBP eCLIP11.16□□□□□ -0.621e-7■■■■■ 37.6
NUMB-212ENST00000554546 SLC22A4Q9H015 551 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 RC3H2Q9HBD1 1191 aaKnown RBP11.16□□□□□ -0.62
NUMB-212ENST00000554546 SPON1Q9HCB6 807 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 MRPL47Q9HD33 250 aaKnown RBP11.16□□□□□ -0.62
NUMB-212ENST00000554546 PRDM9Q9NQV7 894 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 NAALAD2Q9Y3Q0 740 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 PMS2P1A4D2B8 440 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 SLC15A5A6NIM6 579 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 KPNA7A9QM74 516 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 HS6ST1O60243 411 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 MT-ND2P03891 347 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 SNRPB2P08579 225 aaKnown RBP11.16□□□□□ -0.62
NUMB-212ENST00000554546 ACSM4P0C7M7 580 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 ACVR2AP27037 513 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 RPA4Q13156 261 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 PDK2Q15119 407 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 SMAD2Q15796 467 aaKnown RBP11.16□□□□□ -0.62
NUMB-212ENST00000554546 TATDN3Q17R31 274 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 HKDC1Q2TB90 917 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 ANKRD39Q53RE8 183 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 ZNF484Q5JVG2 852 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 MAMDC2Q7Z304 686 aaPredicted RBP11.16□□□□□ -0.62
NUMB-212ENST00000554546 EMC1Q8N766 993 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 C3orf58Q8NDZ4 430 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 HYLS1Q96M11 299 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 SLC30A3Q99726 388 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 PELOQ9BRX2 385 aaKnown RBP11.16□□□□□ -0.62
NUMB-212ENST00000554546 MCUBQ9NWR8 336 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 SARDHQ9UL12 918 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 SLC6A14Q9UN76 642 aa11.16□□□□□ -0.62
NUMB-212ENST00000554546 KHNYNO15037 678 aaKnown RBP11.15□□□□□ -0.62
NUMB-212ENST00000554546 MICAL2O94851 1124 aa11.15□□□□□ -0.62
NUMB-212ENST00000554546 ANGPTL1O95841 491 aa11.15□□□□□ -0.62
NUMB-212ENST00000554546 ALPLP05186 524 aa11.15□□□□□ -0.62
NUMB-212ENST00000554546 HPGDP15428 266 aa11.15□□□□□ -0.62
NUMB-212ENST00000554546 POU3F4P49335 361 aa11.15□□□□□ -0.62
NUMB-212ENST00000554546 MAB21L1Q13394 359 aa11.15□□□□□ -0.62
NUMB-212ENST00000554546 EXOSC2Q13868 293 aaKnown RBP11.15□□□□□ -0.62
NUMB-212ENST00000554546 CAPRIN1Q14444 709 aaKnown RBP11.15□□□□□ -0.62
NUMB-212ENST00000554546 QPRTQ15274 297 aa11.15□□□□□ -0.62
NUMB-212ENST00000554546 DARS2Q6PI48 645 aaKnown RBP11.15□□□□□ -0.62
NUMB-212ENST00000554546 USP17L2Q6R6M4 530 aa11.15□□□□□ -0.62
NUMB-212ENST00000554546 RANBP10Q6VN20 620 aa11.15□□□□□ -0.62
NUMB-212ENST00000554546 ZNF782Q6ZMW2 699 aaPredicted RBP11.15□□□□□ -0.62
NUMB-212ENST00000554546 HTR3DQ70Z44 454 aa11.15□□□□□ -0.62
NUMB-212ENST00000554546 SLC16A13Q7RTY0 426 aa11.15□□□□□ -0.62
NUMB-212ENST00000554546 ZC3HC1Q86WB0 502 aaKnown RBP11.15□□□□□ -0.62
NUMB-212ENST00000554546 GDPD1Q8N9F7 314 aa11.15□□□□□ -0.62
NUMB-212ENST00000554546 PYCR2Q96C36 320 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms