RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 FAM181AQ8N9Y4 354 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 SHKBP1Q8TBC3 707 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 TEX47Q8TBZ9 253 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 TANKQ92844 425 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 PSMG2Q969U7 264 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 PERPQ96FX8 193 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 CYTH2Q99418 400 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 CGREF1Q99674 301 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 FUCA2Q9BTY2 467 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 TRIM54Q9BYV2 358 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 QRSL1Q9H0R6 528 aaKnown RBP2.69□□□□□ -1.98
PRPF39-206ENST00000554429 ETNK1Q9HBU6 452 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 TMEM140Q9NV12 185 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 DNAJC28Q9NX36 388 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 USP36Q9P275 1121 aaKnown RBP2.69□□□□□ -1.98
PRPF39-206ENST00000554429 KLHL14Q9P2G3 628 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 CPNE7Q9UBL6 633 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 DKK4Q9UBT3 224 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 IL20RAQ9UHF4 553 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 ATP6V1HQ9UI12 483 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 HSF4Q9ULV5 492 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 DLGAP4Q9Y2H0 992 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 SRPRBQ9Y5M8 271 aaKnown RBP2.69□□□□□ -1.98
PRPF39-206ENST00000554429 NPFFR2Q9Y5X5 522 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 SPACA6W5XKT8 324 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 ADAMTS20P59510 1910 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 C2orf92A0A1B0GVN3 265 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 RAB19A4D1S5 217 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 GOLGA8OA6NCC3 632 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 C5orf51A6NDU8 294 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 CCDC154A6NI56 674 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 AHRRA9YTQ3 701 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 C9orf172C9J069 976 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 SPECC1L-ADORA2AF8WAN1 911 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 GOLGA8NF8WBI6 632 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 SYT5O00445 386 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 PODXLO00592 558 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 GPR171O14626 319 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 PCDH17O14917 1159 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 SHOXO15266 292 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 NOL4O94818 638 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 SEC24AO95486 1093 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 IFNA14P01570 189 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 ITGAVP06756 1048 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 TUBBP07437 444 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 FDPSP14324 419 aaKnown RBP2.69□□□□□ -1.98
PRPF39-206ENST00000554429 NAGAP17050 411 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 ITGB6P18564 788 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 ATF6P18850 670 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 BMP6P22004 513 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 ADRA1DP25100 572 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 PDHA2P29803 388 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 OR1D2P34982 312 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 CCR2P41597 374 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 HSPA13P48723 471 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 DGKEP52429 567 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 GNG11P61952 73 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 SUMO1P63165 101 aaKnown RBP2.69□□□□□ -1.98
PRPF39-206ENST00000554429 DLG4P78352 724 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 NTHL1P78549 312 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 AMPD2Q01433 879 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 GRIN1Q05586 938 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 GFPT1Q06210 699 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-206ENST00000554429 LGALS3BPQ08380 585 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 SCRN1Q12765 414 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 PNOCQ13519 176 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 UBXN2BQ14CS0 331 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 CHRNA6Q15825 494 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 CALCRLQ16602 461 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 KRTAP21-3Q3LHN1 58 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 PRAMEF14Q5SWL7 426 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 N4BP2L1Q5TBK1 243 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-206ENST00000554429 VWA5B1Q5TIE3 1220 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 ATF7IP2Q5U623 682 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 TDRD10Q5VZ19 366 aaKnown RBP2.69□□□□□ -1.98
PRPF39-206ENST00000554429 KCTD11Q693B1 232 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 SULT1C3Q6IMI6 304 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 PMF1Q6P1K2 205 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 ARMCX5Q6P1M9 558 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 MPZL3Q6UWV2 235 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 SLC36A4Q6YBV0 504 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 PIK3AP1Q6ZUJ8 805 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 C1orf186Q6ZWK4 172 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 TAS2R42Q7RTR8 314 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 EFL1Q7Z2Z2 1120 aaKnown RBP2.69□□□□□ -1.98
PRPF39-206ENST00000554429 TRAPPC11Q7Z392 1133 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 PIP4P1Q86T03 277 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 ITIH5Q86UX2 942 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 CATSPER3Q86XQ3 398 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 ARID3BQ8IVW6 561 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-206ENST00000554429 TRIM59Q8IWR1 403 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 DIS3L2Q8IYB7 885 aaKnown RBP2.69□□□□□ -1.98
PRPF39-206ENST00000554429 SMYD4Q8IYR2 804 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF679Q8IYX0 411 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 ADGRG2Q8IZP9 1017 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 SIX6OS1Q8N1H7 587 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 ELMOD1Q8N336 334 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 DTX3Q8N9I9 347 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 OR52E1Q8NGJ3 308 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 OR13C2Q8NGS9 318 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms