RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 TRIB3Q96RU7 358 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 LYSMD1Q96S90 227 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 SLC38A3Q99624 504 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 EPB41L1Q9H4G0 881 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 PCDH9Q9HC56 1237 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 SARS2Q9NP81 518 aaKnown RBP7.62□□□□□ -1.19
ABCD4-220ENST00000553998 B4GALT6Q9UBX8 382 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 PCYOX1Q9UHG3 505 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 KCND3Q9UK17 655 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 PCDHGA9Q9Y5G4 932 aaKnown RBP7.62□□□□□ -1.19
ABCD4-220ENST00000553998 ESPNB1AK53 854 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 ANKRD66B4E2M5 251 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 PSMD11O00231 422 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 TOX3O15405 576 aaPredicted RBP7.61□□□□□ -1.19
ABCD4-220ENST00000553998 CREG1O75629 220 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 HEXIM1O94992 359 aaKnown RBP7.61□□□□□ -1.19
ABCD4-220ENST00000553998 METTL18O95568 372 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 MT-CYBP00156 380 aaPredicted RBP7.61□□□□□ -1.19
ABCD4-220ENST00000553998 LDLRP01130 860 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 C9P02748 559 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 CYP2A6P11509 494 aaPredicted RBP7.61□□□□□ -1.19
ABCD4-220ENST00000553998 VARSP26640 1264 aaKnown RBP7.61□□□□□ -1.19
ABCD4-220ENST00000553998 COL8A1P27658 744 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 PSMB4P28070 264 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 TNFRSF8P28908 595 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 RPL22P35268 128 aaKnown RBP7.61□□□□□ -1.19
ABCD4-220ENST00000553998 ADRA1AP35348 466 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 DLSTP36957 453 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 POLD2P49005 469 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 EPHB1P54762 984 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 CDK16Q00536 496 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 LRP8Q14114 963 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 DHX34Q14147 1143 aaKnown RBP7.61□□□□□ -1.19
ABCD4-220ENST00000553998 ERV3-1Q14264 604 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 ACOX1Q15067 660 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 CNGA3Q16281 694 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 PYCR3Q53H96 274 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 KCTD11Q693B1 232 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 TTC27Q6P3X3 843 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 IYDQ6PHW0 289 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 C6orf15Q6UXA7 325 aaPredicted RBP7.61□□□□□ -1.19
ABCD4-220ENST00000553998 RANBP10Q6VN20 620 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 TECPR1Q7Z6L1 1165 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 RAVER1Q8IY67 606 aaKnown RBP7.61□□□□□ -1.19
ABCD4-220ENST00000553998 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.61□□□□□ -1.19
ABCD4-220ENST00000553998 MNS1Q8NEH6 495 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 LPCAT1Q8NF37 534 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 SPATA22Q8NHS9 363 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 SLC37A2Q8TED4 501 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 PDCD6IPQ8WUM4 868 aaKnown RBP7.61□□□□□ -1.19
ABCD4-220ENST00000553998 SH3KBP1Q96B97 665 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 AHCYL2Q96HN2 611 aaKnown RBP7.61□□□□□ -1.19
ABCD4-220ENST00000553998 MRGPRX2Q96LB1 330 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 GORASP1Q9BQQ3 440 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 MLPHQ9BV36 600 aaPredicted RBP7.61□□□□□ -1.19
ABCD4-220ENST00000553998 FSD1LQ9BXM9 530 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 DDX47Q9H0S4 455 aaKnown RBP7.61□□□□□ -1.19
ABCD4-220ENST00000553998 LRRC40Q9H9A6 602 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 ARNT2Q9HBZ2 717 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 EIF2B3Q9NR50 452 aaKnown RBP7.61□□□□□ -1.19
ABCD4-220ENST00000553998 CROTQ9UKG9 612 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 CHKBQ9Y259 395 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 NEU2Q9Y3R4 380 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 PLEKHM1Q9Y4G2 1056 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 PCDHGB7Q9Y5F8 929 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 MRFAP1Q9Y605 127 aa7.61□□□□□ -1.19
ABCD4-220ENST00000553998 RP1L1Q8IWN7 2480 aaPredicted RBP7.61□□□□□ -1.19
ABCD4-220ENST00000553998 PRRC2CQ9Y520 2896 aaKnown RBP7.61□□□□□ -1.19
ABCD4-220ENST00000553998 AKAP9Q99996 3911 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 MN1Q10571 1320 aaPredicted RBP7.6□□□□□ -1.19
ABCD4-220ENST00000553998 A0A0J9YYE9 177 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 A1L4Q6 167 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 A6NCN8 305 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 FAM187AA6NFU0 413 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 A8MU76 341 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 TCP11X1B4DZS4 312 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 E7EVH7 732 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 AP3B1O00203 1094 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 INPP4BO15327 924 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 PMPCBO75439 489 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 SUN1O94901 812 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 AP2A1O95782 977 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 EML2O95834 649 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 SOD1P00441 154 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 TRBC1P01850 177 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 KRT14P02533 472 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 PDHA1P08559 390 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 ZSCAN5DPP0CG00 497 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 FGF5P12034 268 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 ZNF28P17035 718 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 ZNF30P17039 623 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 VIPR1P32241 457 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 ETV3P41162 512 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 MAGEA6P43360 314 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 DR1Q01658 176 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 HHEXQ03014 270 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 IL11RAQ14626 422 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 INPP5JQ15735 1006 aaPredicted RBP7.6□□□□□ -1.19
ABCD4-220ENST00000553998 SLC1A5Q15758 541 aa7.6□□□□□ -1.19
ABCD4-220ENST00000553998 PCSK7Q16549 785 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms