RNA–Protein interactions for RNA: ENST00000553673.1

FCF1-204, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-204ENST00000553673 PCDH20Q8N6Y1 951 aaKnown RBP4.13□□□□□ -1.75
FCF1-204ENST00000553673 APBB2Q92870 758 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 ZKSCAN4Q969J2 545 aaPredicted RBP4.13□□□□□ -1.75
FCF1-204ENST00000553673 TAAR8Q969N4 342 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 TMEM19Q96HH6 336 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 IGSF21Q96ID5 467 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 FTOQ9C0B1 505 aaKnown RBP eCLIP4.13□□□□□ -1.75
FCF1-204ENST00000553673 SMARCAD1Q9H4L7 1026 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 GAREM1Q9H706 876 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 MALT1Q9UDY8 824 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 R3HDM2Q9Y2K5 976 aaKnown RBP4.13□□□□□ -1.75
FCF1-204ENST00000553673 AMDHD2Q9Y303 409 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 BRWD3Q6RI45 1802 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 MAP3K15Q6ZN16 1313 aa4.13□□□□□ -1.75
FCF1-204ENST00000553673 TNS1Q9HBL0 1735 aaKnown RBP4.12□□□□□ -1.75
FCF1-204ENST00000553673 PLSCR5A0PG75 271 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 PRSS47A8MTI9 375 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 HMGB1P1B2RPK0 211 aaPredicted RBP4.12□□□□□ -1.75
FCF1-204ENST00000553673 ERVV-1B6SEH8 477 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 PTGES3LE9PB15 166 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 TCERG1O14776 1098 aaKnown RBP4.12□□□□□ -1.75
FCF1-204ENST00000553673 MID1O15344 667 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 SLC16A5O15375 505 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 HS6ST1O60243 411 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 SERPINB2P05120 415 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 SRPRAP08240 638 aaKnown RBP4.12□□□□□ -1.75
FCF1-204ENST00000553673 MCM3P25205 808 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 MAPK4P31152 587 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 PSMB10P40306 273 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 DRG2P55039 364 aaKnown RBP4.12□□□□□ -1.75
FCF1-204ENST00000553673 POU3F1Q03052 451 aaPredicted RBP4.12□□□□□ -1.75
FCF1-204ENST00000553673 PDE1CQ14123 709 aaPredicted RBP4.12□□□□□ -1.75
FCF1-204ENST00000553673 TWISTNBQ3B726 338 aaPredicted RBP4.12□□□□□ -1.75
FCF1-204ENST00000553673 ZNF805Q5CZA5 627 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 KCNT1Q5JUK3 1230 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 C9orf57Q5W0N0 161 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 KRTAP5-4Q6L8H1 288 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 TRNP1Q6NT89 227 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 SPSB3Q6PJ21 355 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 BRAT1Q6PJG6 821 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 CLEC4GQ6UXB4 293 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 CHST9Q7L1S5 443 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 COPS6Q7L5N1 327 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 ARMC9Q7Z3E5 817 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 GPR180Q86V85 440 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 SFR1Q86XK3 245 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 FOXP4Q8IVH2 680 aaPredicted RBP4.12□□□□□ -1.75
FCF1-204ENST00000553673 BEST3Q8N1M1 668 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 THAP6Q8TBB0 222 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 GRAMD2BQ96HH9 432 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 QRFPRQ96P65 431 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 MTERF1Q99551 399 aaKnown RBP4.12□□□□□ -1.75
FCF1-204ENST00000553673 CMKLR1Q99788 373 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 SYT17Q9BSW7 474 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 C1QTNF1Q9BXJ1 281 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 C1QTNF4Q9BXJ3 329 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 KRTAP4-4Q9BYR3 166 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 TMEM39BQ9GZU3 492 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 DDX31Q9H8H2 851 aaKnown RBP4.12□□□□□ -1.75
FCF1-204ENST00000553673 HYPKQ9NX55 129 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 COPG2Q9UBF2 871 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 DBF4Q9UBU7 674 aaPredicted RBP4.12□□□□□ -1.75
FCF1-204ENST00000553673 STK39Q9UEW8 545 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 NIP7Q9Y221 180 aaKnown RBP eCLIP4.12□□□□□ -1.75
FCF1-204ENST00000553673 PAPPAQ13219 1627 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 TOGARAM1Q9Y4F4 1720 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 EP400Q96L91 3159 aa4.12□□□□□ -1.75
FCF1-204ENST00000553673 WNK3Q9BYP7 1800 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 SAA2-SAA4A0A096LPE2 208 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 A6NCN8 305 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 MAP2K7O14733 419 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 CLGNO14967 610 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 ATP2A1O14983 1001 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 VILLO15195 856 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 KCNN4O15554 427 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 DOK2O60496 412 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 TSPAN9O75954 239 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 PPP1R3DO95685 299 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 ALOX12P18054 663 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 USP8P40818 1118 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 UBA7P41226 1012 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 TAS2R38P59533 333 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 PRSS57Q6UWY2 283 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 UNQ6126/PRO20091Q6UXV3 157 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 TSPAN33Q86UF1 283 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 NBPF5PQ86XG9 351 aaPredicted RBP4.11□□□□□ -1.75
FCF1-204ENST00000553673 EPHX4Q8IUS5 362 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 RNF113BQ8IZP6 322 aaKnown RBP4.11□□□□□ -1.75
FCF1-204ENST00000553673 SRBD1Q8N5C6 995 aaKnown RBP4.11□□□□□ -1.75
FCF1-204ENST00000553673 OR1J2Q8NGS2 313 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 OR8K5Q8NH50 307 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 FIG4Q92562 907 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 CDCA5Q96FF9 252 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 WBP1Q96G27 269 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 NUDCD1Q96RS6 583 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 SDF4Q9BRK5 362 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 SPRY4Q9C004 299 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 UBTD1Q9HAC8 227 aa4.11□□□□□ -1.75
FCF1-204ENST00000553673 SEBOXQ9HB31 216 aaPredicted RBP4.11□□□□□ -1.75
FCF1-204ENST00000553673 HAUS2Q9NVX0 235 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms