RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 CCDC30Q5VVM6 783 aa6.12□□□□□ -1.43
PCNX1-205ENST00000553508 ZNF518AQ6AHZ1 1483 aa6.12□□□□□ -1.43
PCNX1-205ENST00000553508 KIAA0930Q6ICG6 404 aaPredicted RBP6.12□□□□□ -1.43
PCNX1-205ENST00000553508 SARM1Q6SZW1 724 aa6.12□□□□□ -1.43
PCNX1-205ENST00000553508 CEP97Q8IW35 865 aa6.12□□□□□ -1.43
PCNX1-205ENST00000553508 TEX11Q8IYF3 940 aa6.12□□□□□ -1.43
PCNX1-205ENST00000553508 NGEFQ8N5V2 710 aa6.12□□□□□ -1.43
PCNX1-205ENST00000553508 USP6NLQ92738 828 aa6.12□□□□□ -1.43
PCNX1-205ENST00000553508 HDAC2Q92769 488 aaKnown RBP6.12□□□□□ -1.43
PCNX1-205ENST00000553508 PRMT6Q96LA8 375 aaPredicted RBP6.12□□□□□ -1.43
PCNX1-205ENST00000553508 C17orf77Q96MU5 243 aa6.12□□□□□ -1.43
PCNX1-205ENST00000553508 OR2A14Q96R47 310 aa6.12□□□□□ -1.43
PCNX1-205ENST00000553508 SLX1AQ9BQ83 275 aa6.12□□□□□ -1.43
PCNX1-205ENST00000553508 SCAPERQ9BY12 1400 aa6.12□□□□□ -1.43
PCNX1-205ENST00000553508 YIPF1Q9Y548 306 aa6.12□□□□□ -1.43
PCNX1-205ENST00000553508 ARHGAP5Q13017 1502 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 ATP10AO60312 1499 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 C9orf84Q5VXU9 1444 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 A0A1W2PPI3 338 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 FRMD3A2A2Y4 597 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 DUXAA6NLW8 204 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 PLK4O00444 970 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 EDIL3O43854 480 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 USO1O60763 962 aaKnown RBP6.11□□□□□ -1.43
PCNX1-205ENST00000553508 INHBAP08476 426 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 CLTBP09497 229 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 MSH3P20585 1137 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 MAPK4P31152 587 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 CAMPP49913 170 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 PRAMEP78395 509 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 DDX10Q13206 875 aaKnown RBP6.11□□□□□ -1.43
PCNX1-205ENST00000553508 KIR2DS3Q14952 304 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 RAB6CQ53S08 254 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 TECRLQ5HYJ1 363 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 ARHGAP11AQ6P4F7 1023 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 MAATS1Q7Z4T9 603 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 HACE1Q8IYU2 909 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 TMTC2Q8N394 836 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 WDTC1Q8N5D0 677 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 TRPC4APQ8TEL6 797 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 FCAMRQ8WWV6 532 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 FSD1Q9BTV5 496 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 RAB6CQ9H0N0 254 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 RCC2Q9P258 522 aaKnown RBP6.11□□□□□ -1.43
PCNX1-205ENST00000553508 TMEM184BQ9Y519 407 aaPredicted RBP6.11□□□□□ -1.43
PCNX1-205ENST00000553508 SESN1Q9Y6P5 492 aa6.11□□□□□ -1.43
PCNX1-205ENST00000553508 CCDC18Q5T9S5 1454 aa6.1□□□□□ -1.43
PCNX1-205ENST00000553508 TROQ12816 1431 aaPredicted RBP6.1□□□□□ -1.43
PCNX1-205ENST00000553508 YEATS2Q9ULM3 1422 aa6.1□□□□□ -1.43
PCNX1-205ENST00000553508 A0A087X0M5 115 aa6.1□□□□□ -1.43
PCNX1-205ENST00000553508 A0A1B0GX30 115 aa6.1□□□□□ -1.43
PCNX1-205ENST00000553508 TUBBP07437 444 aa6.1□□□□□ -1.43
PCNX1-205ENST00000553508 TUBB4BP68371 445 aa6.1□□□□□ -1.43
PCNX1-205ENST00000553508 DUOXA1Q1HG43 343 aa6.1□□□□□ -1.43
PCNX1-205ENST00000553508 ASTE1Q2TB18 679 aaPredicted RBP6.1□□□□□ -1.43
PCNX1-205ENST00000553508 ZNF876PQ49A33 203 aa6.1□□□□□ -1.43
PCNX1-205ENST00000553508 FAM180BQ6P0A1 224 aa6.1□□□□□ -1.43
PCNX1-205ENST00000553508 TMEM154Q6P9G4 183 aa6.1□□□□□ -1.43
PCNX1-205ENST00000553508 CFAP77Q6ZQR2 320 aa6.1□□□□□ -1.43
PCNX1-205ENST00000553508 TRPT1Q86TN4 253 aaKnown RBP6.1□□□□□ -1.43
PCNX1-205ENST00000553508 PTOV1Q86YD1 416 aa6.1□□□□□ -1.43
PCNX1-205ENST00000553508 ANKRD52Q8NB46 1076 aa6.1□□□□□ -1.43
PCNX1-205ENST00000553508 FAM76AQ8TAV0 307 aa6.1□□□□□ -1.43
PCNX1-205ENST00000553508 ZNF473Q8WTR7 871 aaKnown RBP6.1□□□□□ -1.43
PCNX1-205ENST00000553508 SEMA4DQ92854 862 aa6.1□□□□□ -1.43
PCNX1-205ENST00000553508 SLC52A3Q9NQ40 469 aa6.1□□□□□ -1.43
PCNX1-205ENST00000553508 SEPT11Q9NVA2 429 aaKnown RBP6.1□□□□□ -1.43
PCNX1-205ENST00000553508 ARHGAP35Q9NRY4 1499 aa6.09□□□□□ -1.43
PCNX1-205ENST00000553508 OR2M5A3KFT3 312 aa6.09□□□□□ -1.43
PCNX1-205ENST00000553508 PGPEP1LA6NFU8 196 aa6.09□□□□□ -1.43
PCNX1-205ENST00000553508 C15orf62A8K5M9 175 aa6.09□□□□□ -1.43
PCNX1-205ENST00000553508 H0YIN7 160 aa6.09□□□□□ -1.43
PCNX1-205ENST00000553508 BLOC1S5-TXNDC5H3BN57 136 aa6.09□□□□□ -1.43
PCNX1-205ENST00000553508 NTN3O00634 580 aaPredicted RBP6.09□□□□□ -1.43
PCNX1-205ENST00000553508 TMCC2O75069 709 aa6.09□□□□□ -1.43
PCNX1-205ENST00000553508 SRPRAP08240 638 aaKnown RBP6.09□□□□□ -1.43
PCNX1-205ENST00000553508 PATE4P0C8F1 98 aa6.09□□□□□ -1.43
PCNX1-205ENST00000553508 ACTN1P12814 892 aa6.09□□□□□ -1.43
PCNX1-205ENST00000553508 GNAZP19086 355 aa6.09□□□□□ -1.43
PCNX1-205ENST00000553508 CHRNB4P30926 498 aa6.09□□□□□ -1.43
PCNX1-205ENST00000553508 CDH8P55286 799 aa6.09□□□□□ -1.43
PCNX1-205ENST00000553508 SPOCK1Q08629 439 aa6.09□□□□□ -1.43
PCNX1-205ENST00000553508 MVPQ14764 893 aaKnown RBP6.09□□□□□ -1.43
PCNX1-205ENST00000553508 CRYMQ14894 314 aa6.09□□□□□ -1.43
PCNX1-205ENST00000553508 PCGF3Q3KNV8 242 aa6.09□□□□□ -1.43
PCNX1-205ENST00000553508 ZDHHC20Q5W0Z9 365 aa6.09□□□□□ -1.43
PCNX1-205ENST00000553508 JADE1Q6IE81 842 aa6.09□□□□□ -1.43
PCNX1-205ENST00000553508 RBMS3Q6XE24 437 aaKnown RBP6.09□□□□□ -1.43
PCNX1-205ENST00000553508 TPRG1Q6ZUI0 275 aa6.09□□□□□ -1.43
PCNX1-205ENST00000553508 ZNF534Q76KX8 674 aa6.09□□□□□ -1.43
PCNX1-205ENST00000553508 RSRC2Q7L4I2 434 aaKnown RBP6.09□□□□□ -1.43
PCNX1-205ENST00000553508 TICAM1Q8IUC6 712 aa6.09□□□□□ -1.43
PCNX1-205ENST00000553508 SCFD2Q8WU76 684 aa6.09□□□□□ -1.43
PCNX1-205ENST00000553508 DDOQ99489 341 aa6.09□□□□□ -1.43
PCNX1-205ENST00000553508 SRSF8Q9BRL6 282 aaKnown RBP6.09□□□□□ -1.43
PCNX1-205ENST00000553508 APOBEC3GQ9HC16 384 aaKnown RBP6.09□□□□□ -1.43
PCNX1-205ENST00000553508 EIF2B3Q9NR50 452 aaKnown RBP6.09□□□□□ -1.43
PCNX1-205ENST00000553508 OGFRQ9NZT2 677 aa6.09□□□□□ -1.43
PCNX1-205ENST00000553508 ZNF624Q9P2J8 865 aaPredicted RBP6.09□□□□□ -1.43
PCNX1-205ENST00000553508 FBXL17Q9UF56 701 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms