RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 MYO1HQ8N1T3 1032 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 FNDC5Q8NAU1 212 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 ALG14Q96F25 216 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 YME1L1Q96TA2 773 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 CIB1Q99828 191 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 KCTD14Q9BQ13 255 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-205ENST00000553474 LRRC3Q9BY71 257 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 FAM126AQ9BYI3 521 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-205ENST00000553474 CD320Q9NPF0 282 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 EIF2B4Q9UI10 523 aaKnown RBP12.74□□□□□ -0.37
SHMT2-205ENST00000553474 VPS51Q9UID3 782 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 MYRFQ9Y2G1 1151 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 AP3M1Q9Y2T2 418 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 OARD1Q9Y530 152 aa12.74□□□□□ -0.37
SHMT2-205ENST00000553474 A0A1B0GTL3 188 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 NCF1BA6NI72 391 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-205ENST00000553474 NCF1CA8MVU1 366 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-205ENST00000553474 EIF3FO00303 357 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-205ENST00000553474 TSPAN3O60637 253 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 SNAP91O60641 907 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 ARHGEF15O94989 841 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 OR4F21O95013 312 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 IRF1P10914 325 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 NCF1P14598 390 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-205ENST00000553474 ZNF23P17027 643 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 HOXB6P17509 224 aaKnown RBP12.73□□□□□ -0.37
SHMT2-205ENST00000553474 RPL17P18621 184 aaKnown RBP12.73□□□□□ -0.37
SHMT2-205ENST00000553474 PIK3CGP48736 1102 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 CCT8P50990 548 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 EPHB3P54753 998 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 NME5P56597 212 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 PRKCQQ04759 706 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 PLD1Q13393 1074 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 SLC5A9Q2M3M2 681 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 SBSNQ6UWP8 590 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 CHRDL2Q6WN34 429 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 Q6ZNB5 142 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 FKBP9P1Q75LS8 142 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 SPNS2Q8IVW8 549 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 CPXM2Q8N436 756 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 SNX31Q8N9S9 440 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 LEMD2Q8NC56 503 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 TNIP2Q8NFZ5 429 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 METTL6Q8TCB7 284 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 PROKR1Q8TCW9 393 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 PIH1D2Q8WWB5 315 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 TFAP2CQ92754 450 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 PPP3R2Q96LZ3 170 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 LYSMD1Q96S90 227 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 GDF15Q99988 308 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 TMEM79Q9BSE2 394 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 HERC2P3Q9BVR0 1158 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 VN1R3Q9BXE9 311 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 ZFYVE1Q9HBF4 777 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 RDH14Q9HBH5 336 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 LATS2Q9NRM7 1088 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 MAGEL2Q9UJ55 1249 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 SLC8A2Q9UPR5 921 aa12.73□□□□□ -0.37
SHMT2-205ENST00000553474 DENND4CQ5VZ89 1909 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 C2orf78A6NCI8 922 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 FFAR2O15552 330 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 TULP3O75386 442 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 TIPRLO75663 272 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 WDR47O94967 919 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 PRAMEF1O95521 474 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 TRBC1P01850 177 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 CBSLP0DN79 551 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 JAK1P23458 1154 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 MZF1P28698 734 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-205ENST00000553474 PRDX3P30048 256 aaKnown RBP12.72□□□□□ -0.37
SHMT2-205ENST00000553474 CBSP35520 551 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 GSK3BP49841 420 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 BCL2L1Q07817 233 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 NFATC2Q13469 925 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 GTF2H2Q13888 395 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 NADK2Q4G0N4 442 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 KCTD21Q4G0X4 260 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 SULT1C3Q6IMI6 304 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 GTF2H2CQ6P1K8 395 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 LINGO4Q6UY18 593 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 Q6ZSR9 355 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 DNAJB7Q7Z6W7 309 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-205ENST00000553474 SPPL2CQ8IUH8 684 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 ADGRG5Q8IZF4 528 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 CDYL2Q8N8U2 506 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 TSPAN14Q8NG11 270 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 OR2T11Q8NH01 316 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 DNAJB8Q8NHS0 232 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 UBTD2Q8WUN7 234 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 RMND5BQ96G75 393 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-205ENST00000553474 LRCH3Q96II8 777 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 PLEKHG4BQ96PX9 1271 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 RBM38Q9H0Z9 239 aaKnown RBP12.72□□□□□ -0.37
SHMT2-205ENST00000553474 IL1RL2Q9HB29 575 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 BPIFA1Q9NP55 256 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 GIMAP2Q9UG22 337 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 LSM7Q9UK45 103 aaKnown RBP12.72□□□□□ -0.37
SHMT2-205ENST00000553474 AURKCQ9UQB9 309 aa12.72□□□□□ -0.37
SHMT2-205ENST00000553474 RANBP2P49792 3224 aaKnown RBP12.72□□□□□ -0.37
SHMT2-205ENST00000553474 ZFC3H1O60293 1989 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms